PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32510.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 759aa MW: 84513.7 Da PI: 6.2787

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.7	6.9e-27	90	192	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ +e++ +r+ +t+Cka+++vk++ dgkw+++++++eHnH GAY32510.1 90 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqskqdQENATGRRSCAKTDCKASMHVKRRPDGKWVIHSFVKEHNH 188 5****************************************9999999887655555669999**************************** PP FAR1 88 elap 91 el p GAY32510.1 189 ELLP 192 *975 PP
2	FAR1	58.5	2.1e-18	485	556	1	75
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgk 75 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r++++++t+Cka+++vk++ dg+ GAY32510.1 485 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---SSRRSSVKKTDCKASMHVKRRADGN 556 5**************************************999888...889999************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MDIDLRLPSG EQTKEEEEHN GIDNMLDGEE KLSLHNGEIE SGNIVVADEV RAEDGGGVNS 60 PTEEMVMFKE DTNLEPLSGM EFESHGEAYS FYQEYARSMG FNTAIQNSRR SKTSREFIDA 120 KFACSRYGTK REYDKSYNRP RARQSKQDQE NATGRRSCAK TDCKASMHVK RRPDGKWVIH 180 SFVKEHNHEL LPAQAVSEQT RKMYAAMARQ FAEYKNRFQV EVVGAVACHP KQESQNETNI 240 IFRVQDLEKT QDFVRAMKLS EEGSLSQESY GIAFRALEEA VGNCLSVNTS NKNLVEAVTS 300 PTHGLICVEE DNQSRSMNKT NKRKNLTKKR KVQLNLMAPT RDNYYGNQQT IQGLGQLNSI 360 APSHDGYYSA QQGMHGLGQM DFFRTPTSFT YGIRITVGCR LLFSPEIGGV VEKRVGTDSD 420 DMGGQDNLHG AGGSMSENMI NVVDAVYSGD VVVDSSKMAV AGFEGESNFE PRNGIEFESH 480 EAAYSFYQEY AKSMGFTTSI KNSRRSKKSK EFIDAKFACS RYGVTPESDS GSSRRSSVKK 540 TDCKASMHVK RRADGNEEGS LSDENYNIVF RALVDGLKNC VNVNNSSNNV LECSSHVQGL 600 REAEEINQGS LATKSNKKKN TIRKRKVGTG TKVQSEQDIL LVEAQESLQQ MENLTSDGIA 660 LNGFYGSQQN VQGLVQLNLM EPPHDGYYVN QQSLQGLGQL NSIAPGHDGF FGAQQSMHGL 720 GQLDFRPPTS YSYGLQVGIK DTDESHLRQT QLHEGMNNV

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MDIDLRLPSG EQTKEEEEHN GIDNMLDGEE KLSLHNGEIE SGNIVVADEV RAEDGGGVNS  60
PTEEMVMFKE DTNLEPLSGM EFESHGEAYS FYQEYARSMG FNTAIQNSRR SKTSREFIDA  120
KFACSRYGTK REYDKSYNRP RARQSKQDQE NATGRRSCAK TDCKASMHVK RRPDGKWVIH  180
SFVKEHNHEL LPAQAVSEQT RKMYAAMARQ FAEYKNRFQV EVVGAVACHP KQESQNETNI  240
IFRVQDLEKT QDFVRAMKLS EEGSLSQESY GIAFRALEEA VGNCLSVNTS NKNLVEAVTS  300
PTHGLICVEE DNQSRSMNKT NKRKNLTKKR KVQLNLMAPT RDNYYGNQQT IQGLGQLNSI  360
APSHDGYYSA QQGMHGLGQM DFFRTPTSFT YGIRITVGCR LLFSPEIGGV VEKRVGTDSD  420
DMGGQDNLHG AGGSMSENMI NVVDAVYSGD VVVDSSKMAV AGFEGESNFE PRNGIEFESH  480
EAAYSFYQEY AKSMGFTTSI KNSRRSKKSK EFIDAKFACS RYGVTPESDS GSSRRSSVKK  540
TDCKASMHVK RRADGNEEGS LSDENYNIVF RALVDGLKNC VNVNNSSNNV LECSSHVQGL  600
REAEEINQGS LATKSNKKKN TIRKRKVGTG TKVQSEQDIL LVEAQESLQQ MENLTSDGIA  660
LNGFYGSQQN VQGLVQLNLM EPPHDGYYVN QQSLQGLGQL NSIAPGHDGF FGAQQSMHGL  720
GQLDFRPPTS YSYGLQVGIK DTDESHLRQT QLHEGMNNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	1e-104	FAR1 family protein