PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY32252.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 876aa MW: 96239.4 Da PI: 7.0362

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY32252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.5	1.2e-18	287	387	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++lv++ GAY32252.1 287 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGKLVMG 383 99************************555567778***********99899999999.*******************876.77778887 PP EE-S CS B3 96 vfrk 99 ++++ GAY32252.1 384 FRKA 387 7765 PP

Sequence ? help Back to Top
Protein Sequence Length: 876 aa Download sequence
MESRTCMNGK CRASSSIEWR KGWPLQSGGF AVLCDKCGSA FEKLIFCDEF HSKDSGWRKC 60 ASCSKLLDGG GVWCINCAKN PGLDSIPGDD PNGFGTLKTD NTGDLPSTSV DNQLGGSDDK 120 FKLLQLGNSS ESVGLRHLLQ FRNDDLDGSF RKVKPEEAAK SDISKANIGA KDIYGPLAHT 180 NLSITLGSPG INSNSFPSAV VDEKEHSKTS AIIHQGPKSR HLLPKPPKLA LATGSEANAG 240 ISQIRVARPP AEGRGRNQLL PRYWPRITDQ ELQQLSGDSN STIVPLFEKV LSASDAGRIG 300 RLVLPKACAE AYFPPISQPE GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS 360 MQLQAGDTVT FSRMDPEGKL VMGFRKASNA VSVQDTQPSA IPNGGHSSES FFSGVFENLS 420 ILSGYSGVLQ SLKGSTDPHL SSLSKQLNSP PGDINWVKSE KHEDKTREGL LPPSMLVPER 480 KRSRNIGSKR KRLLIDRLDV LELKLTWEEA QDMLYPPPSV MPSIVTVEDH VFEEYEDPPV 540 FGKRSIFIVR TSGGQEQWAQ CDGCSKWRRL PVDVLLPPKW TCMDNVWDHN RCSCSAPDEL 600 TPREVENLLR LNKDFKKRKI ATSHRLNQEH EPSGLDALSN AAILGENMGD PGTASVATTT 660 KHPRHRPGCS CIVCIQPPSG KGKHKPTCTC LVCMTVKRRF KTLMMRKKKR QSEREEEVAQ 720 RNQPTWGPKE EAEVDSSSKH VSSHLDPSEN EARSANELES KGQNNNLSGK LAESSKAELD 780 LNCHPEREEA QAGLNRVSMM KLLQVASHPL ETYLKQNGLT SLTSDQQASS GTHAPPQAAG 840 ESEGQLNELA SATQERESGG EDNCEPVSDQ IPDDPE

Sequence ? help Back to Top

Protein Sequence Length: 876 aa Download sequence

MESRTCMNGK CRASSSIEWR KGWPLQSGGF AVLCDKCGSA FEKLIFCDEF HSKDSGWRKC  60
ASCSKLLDGG GVWCINCAKN PGLDSIPGDD PNGFGTLKTD NTGDLPSTSV DNQLGGSDDK  120
FKLLQLGNSS ESVGLRHLLQ FRNDDLDGSF RKVKPEEAAK SDISKANIGA KDIYGPLAHT  180
NLSITLGSPG INSNSFPSAV VDEKEHSKTS AIIHQGPKSR HLLPKPPKLA LATGSEANAG  240
ISQIRVARPP AEGRGRNQLL PRYWPRITDQ ELQQLSGDSN STIVPLFEKV LSASDAGRIG  300
RLVLPKACAE AYFPPISQPE GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV LEGVTPCIQS  360
MQLQAGDTVT FSRMDPEGKL VMGFRKASNA VSVQDTQPSA IPNGGHSSES FFSGVFENLS  420
ILSGYSGVLQ SLKGSTDPHL SSLSKQLNSP PGDINWVKSE KHEDKTREGL LPPSMLVPER  480
KRSRNIGSKR KRLLIDRLDV LELKLTWEEA QDMLYPPPSV MPSIVTVEDH VFEEYEDPPV  540
FGKRSIFIVR TSGGQEQWAQ CDGCSKWRRL PVDVLLPPKW TCMDNVWDHN RCSCSAPDEL  600
TPREVENLLR LNKDFKKRKI ATSHRLNQEH EPSGLDALSN AAILGENMGD PGTASVATTT  660
KHPRHRPGCS CIVCIQPPSG KGKHKPTCTC LVCMTVKRRF KTLMMRKKKR QSEREEEVAQ  720
RNQPTWGPKE EAEVDSSSKH VSSHLDPSEN EARSANELES KGQNNNLSGK LAESSKAELD  780
LNCHPEREEA QAGLNRVSMM KLLQVASHPL ETYLKQNGLT SLTSDQQASS GTHAPPQAAG  840
ESEGQLNELA SATQERESGG EDNCEPVSDQ IPDDPE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	697	708	KRRFKTLMMRKK
2	697	710	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein