PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY31766.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 293aa    MW: 32707.6 Da    PI: 6.7363
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY31766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.41.7e-108227888373
        GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                 +P+lkf+h+taNqaIlea++g+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++++f f+ ++a+rl
  GAY31766.1   2 CPYLKFAHFTANQAILEAFDGHDCVHVVDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFTFRGVAASRL 100
                 9************************************************************************************************** PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                 ed+++++L+v+p+EalaVn++lqlh+ll ++ + +s+ + vL  +++l+Pk+++vveqe++hn+++Fl+rf+ al+yys++fdslea      + ++ +
  GAY31766.1 101 EDVKPWMLQVSPKEALAVNSILQLHKLLGSDPARNSPMEMVLGWIRNLNPKIMTVVEQESNHNQPEFLDRFTTALYYYSTMFDSLEAC---PLQPEKAL 196
                 *************************************************************************************998...34556667 PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  + +l+rei+nv       r+erhe l+kWr+rl  aGF+p++l+++a  qa++ll  ++ +gy+vee +g+l+lgW++rpL+++SaW
  GAY31766.1 197 AEIYLQREICNV------GRVERHEPLAKWRNRLAGAGFRPLHLGSNAFRQASMLLTLFSAEGYSVEETEGCLTLGWHSRPLIAASAW 278
                 7778*******8......6889****************************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
ACPYLKFAHF TANQAILEAF DGHDCVHVVD FNLMHGLQWP ALIQALALRP GGPPLLRLTG  60
IGPPSPDGRD SLREIGLRLA ELARSVNIRF TFRGVAASRL EDVKPWMLQV SPKEALAVNS  120
ILQLHKLLGS DPARNSPMEM VLGWIRNLNP KIMTVVEQES NHNQPEFLDR FTTALYYYST  180
MFDSLEACPL QPEKALAEIY LQREICNVGR VERHEPLAKW RNRLAGAGFR PLHLGSNAFR  240
QASMLLTLFS AEGYSVEETE GCLTLGWHSR PLIAASAWHA VPDDLANLHD NVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-105GRAS family protein