PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY31729.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 292aa MW: 33523.8 Da PI: 6.5072

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY31729.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00045	3	21	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 Cgk+F + +L++H H GAY31729.1 3 GCGKTFIDAASLRKHAHIH 21 7**************9877 PP
2	zf-C2H2	16.6	2.2e-05	26	50	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H GAY31729.1 26 YQCHyeGCGKKFLDSSKLKRHFLIH 50 9********************8877 PP
3	zf-C2H2	22.8	2.4e-07	56	80	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+Cp Cgk Fs nL++H++tH GAY31729.1 56 YVCPheGCGKAFSLDFNLRSHMKTH 80 99**********************9 PP
4	zf-C2H2	18.2	6.8e-06	86	110	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H GAY31729.1 86 HICPypDCGKRYAHEYKLKNHIASH 110 679999*****************96 PP
5	zf-C2H2	13.4	0.00023	149	174	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+++ H GAY31729.1 149 YACPyeGCEKAYIHEYKLKLHLKReH 174 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
YEGCGKTFID AASLRKHAHI HGERQYQCHY EGCGKKFLDS SKLKRHFLIH TGERDYVCPH 60 EGCGKAFSLD FNLRSHMKTH SQENYHICPY PDCGKRYAHE YKLKNHIASH HEKNAAVEVP 120 RYATPPERIT KTPKPPAGVY GSASSERPYA CPYEGCEKAY IHEYKLKLHL KREHPGHMSD 180 ENAENATTNA DNEMDEGSDQ DAYAGKRVNG KSQKQSRAKP NLKMPPAKVT QRKSSTPSPA 240 TLNVVRKQQW TPKEEVYEEE DSEETEEDRD NVEDGFRYGE NNEDDDEETE YE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.2	1e-119	C2H2 family protein