PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr20323.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 263aa MW: 30531.4 Da PI: 7.4212

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr20323.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.7	2.3e-28	99	157	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+ ++++fpr+Y+rC++a +C v+kkv+r++++ k++ tYegeHnh+ Dr20323.1 99 KDGYHWRKYGQKVTRNNPFPRAYFRCAMApKCLVRKKVQRCSNNAKFLMATYEGEHNHP 157 7*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MEMNGHVLVS NQNKDYERVQ EIKEEIERLN EENKELTSML DLVSTNXBNL KAQVEKITRE 60 MDLDDGLMII KEMPLELQNT KTWTSFFRCD DNNGSLTTKD GYHWRKYGQK VTRNNPFPRA 120 YFRCAMAPKC LVRKKVQRCS NNAKFLMATY EGEHNHPPPN KYFLNTTQST TNSNLILSMT 180 SCLDLNSSRN AEIFSENHKN NEYFNTCINE AGTSNNNNNN NNRLEEYINL LKSDPNFTQL 240 LARKIVFSML NNNNNNNNNS KIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25000.1	5e-33	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr20323.1