PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr16499.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 241aa MW: 27478.6 Da PI: 10.5594

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr16499.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.6	1.9e-31	182	240	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YY+C+s+ gCp++k+ver+ ++p+++++tYegeHnh+ Dr16499.1 182 SDDYSWRKYGQKPIKGSPYPRGYYKCSSKrGCPARKHVERCFQEPSMLIVTYEGEHNHT 240 69************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEQVEKANRD AVQSSQRVLN LISQSKEQQM LPFRSLMAET RDAVSKFKKV VTLLSISNGG 60 GQARAKIVKK SQIPIAHTMF IDNQFARNPY SLNHHKHLMW NADMFRLCSS STTTTLSSNM 120 SFVSSLSMDD KPFQMIGRPI SSELVTRNTT NARCHCSKKR KNRVKRSIMV PAISNKLADI 180 PSDDYSWRKY GQKPIKGSPY PRGYYKCSSK RGCPARKHVE RCFQEPSMLI VTYEGEHNHT 240 D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28650.1	1e-54	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr16499.1