PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr15656.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 504aa MW: 57421.9 Da PI: 5.4954

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr15656.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.3	1.8e-29	375	433	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ve++++d ++++itY+++Hnh+ Dr15656.1 375 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVEKCKTDASMLIITYTSNHNHP 433 699*********************9988**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MADERYNRKN PAVKRILQEV KEMQSNPSDD FMSLPLEENI FEWQFAICGP RDSEFEGGIY 60 HGRIQLPAEY PFKPPAFMLL TPNGRFETQT KICLSISNYH PEHWQPSWSV SEIFQCICVN 120 YMFLEIQFVT EMSSFCQPVR TALVALIAFM PTNPDGALGS LDYNKEERRK LAIKSREVIP 180 KYGSSERQNL IDEIHRYMLG KAPPVPDILP TPATDDTTSA EANTAPNSVT ENASLDVATA 240 PIQEPPNPEN EPMMVEDVHE VQVNAAAGPL QVGFRARVSL SRRAPASQTI EQPQRPVTRA 300 QKPSDDRLFT LAAIEEEIKR RIAYRERKEY NGKSYKCKRK DDRSSIIKEK VVQKVVVTVR 360 VETKAGKQKS EGPPSDFWSW RKYGQKPIKG SPYPRGYYRC STSKGCSAKK QVEKCKTDAS 420 MLIITYTSNH NHPGPDLLSI QPQTKVNSKC KEEEDDEEEE EEEIVKNEKK STEENDFFDE 480 LEELPICSSL RSSFFDDKSL LQLS

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MADERYNRKN PAVKRILQEV KEMQSNPSDD FMSLPLEENI FEWQFAICGP RDSEFEGGIY  60
HGRIQLPAEY PFKPPAFMLL TPNGRFETQT KICLSISNYH PEHWQPSWSV SEIFQCICVN  120
YMFLEIQFVT EMSSFCQPVR TALVALIAFM PTNPDGALGS LDYNKEERRK LAIKSREVIP  180
KYGSSERQNL IDEIHRYMLG KAPPVPDILP TPATDDTTSA EANTAPNSVT ENASLDVATA  240
PIQEPPNPEN EPMMVEDVHE VQVNAAAGPL QVGFRARVSL SRRAPASQTI EQPQRPVTRA  300
QKPSDDRLFT LAAIEEEIKR RIAYRERKEY NGKSYKCKRK DDRSSIIKEK VVQKVVVTVR  360
VETKAGKQKS EGPPSDFWSW RKYGQKPIKG SPYPRGYYRC STSKGCSAKK QVEKCKTDAS  420
MLIITYTSNH NHPGPDLLSI QPQTKVNSKC KEEEDDEEEE EEEIVKNEKK STEENDFFDE  480
LEELPICSSL RSSFFDDKSL LQLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	3e-31	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr15656.1