PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr14917.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 315aa    MW: 33842.2 Da    PI: 10.202
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr14917.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1001.5e-31236293359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeH+h+
  Dr14917.1 236 DEYSWRKYGQKPIKGSPYPRGYYKCSSLrGCPARKHVERAPDDPSMLIVTYEGEHRHT 293
                9*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAXDLMGYTK MNDQIAIQEA AAAGLRGLEH LVSQLSNQSS AMDCREITDQ TVSKFKKVIS  60
ILNRTGHARF RRGAVTSPAP STVTPQPRLL PPPPPPPQTL TLDFTKPNTG SIPIIVSGAG  120
PEMASSHYGK DNFSICTSIS SANSSFLSSI TNDGSVSNGK TSSSLLFTPI AAVSAGGRPP  180
LSSNYKKRCS SHSHSDDLTA KLSGGRCHCS KRRKSRVKKT IRVPAISSKM ADIPPDEYSW  240
RKYGQKPIKG SPYPRGYYKC SSLRGCPARK HVERAPDDPS MLIVTYEGEH RHTPAAVSSA  300
AAASDPIIFD PARDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-104WRKY family protein