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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr13408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | WRKY | ||||||||
Protein Properties | Length: 181aa MW: 20302.3 Da PI: 10.6345 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 29.6 | 1.4e-09 | 129 | 147 | 3 | 21 |
-SS-EEEEEEE--TT-SS- CS WRKY 3 DgynWrKYGqKevkgsefp 21 D+++WrKYGqK++kgs++p Dr13408.1 129 DEFTWRKYGQKPIKGSPYP 147 99****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MLSNNAKEME ADNFAAVAEE LMKKVRQGLS FIDGRRVGHA RFRKGPVLVN QSSSETMVLN 60 CQPLQCLPPM APGEGRCTEW RSSLSXESPA MKRRLEECCH CGKKRKXKMR RMVRVPLMAI 120 NKGSTEQLDE FTWRKYGQKP IKGSPYPSEV SGSRGLRRPL PPFPAQAALL LPMTGIPPQL 180 L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 106 | KRRLEECCHCGKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G23320.2 | 8e-09 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr13408.1 |