PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr09223.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 511aa MW: 56590.1 Da PI: 7.4164

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr09223.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.6	2.2e-32	184	240	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh Dr09223.1 184 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSI-DGQITEIVYKGTHNHC 240 8**************************************.*************5 PP
2	WRKY	105.1	3.8e-33	350	408	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ Dr09223.1 350 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDLRAVITTYEGKHNHD 408 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MTSSSSANSH SSVPPFSFAT TPFSSSFSEL LAGAVDHDED LSLSPSNFSL TRGVPKFKSF 60 NPPSLPISPS SCFSIPPGLS PAELLDSPVL LSSSNILPSP TTGTIPAQSF NWRSSFQQQQ 120 SIKEEPKQTR PFSDFSFQTK QNFHHNEEQK VIPTLQQDYN NNNNNNNNNN NNNNASMKEQ 180 KKSDDGYNWR KYGQKQVKGS ENPRSYYKCT YPNCPTKKKV ERSIDGQITE IVYKGTHNHC 240 KPQSTRRNSA SSQAYQAVAP TETNEHSYGT PIDSAATPEN SSVSFEDDDV DMSSKRSKTG 300 SENFDDDDNN EPDAKRWKKE GEHESMSAAG NRTVREPRVV VQTTSDIDIL DDGYRWRKYG 360 QKVVKGNPNP RSYYKCTTVG CPVRKHVERA SHDLRAVITT YEGKHNHDVP AARGSGSHAV 420 VNRSTADVNV TTAIRPSAMF GRGGGGGSQG QGPFTLEMLQ PQVNYGMVSG YDNAMASYLN 480 HQQQQKHLES VMISKAKDEP KDDLFIESLL C

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MTSSSSANSH SSVPPFSFAT TPFSSSFSEL LAGAVDHDED LSLSPSNFSL TRGVPKFKSF  60
NPPSLPISPS SCFSIPPGLS PAELLDSPVL LSSSNILPSP TTGTIPAQSF NWRSSFQQQQ  120
SIKEEPKQTR PFSDFSFQTK QNFHHNEEQK VIPTLQQDYN NNNNNNNNNN NNNNASMKEQ  180
KKSDDGYNWR KYGQKQVKGS ENPRSYYKCT YPNCPTKKKV ERSIDGQITE IVYKGTHNHC  240
KPQSTRRNSA SSQAYQAVAP TETNEHSYGT PIDSAATPEN SSVSFEDDDV DMSSKRSKTG  300
SENFDDDDNN EPDAKRWKKE GEHESMSAAG NRTVREPRVV VQTTSDIDIL DDGYRWRKYG  360
QKVVKGNPNP RSYYKCTTVG CPVRKHVERA SHDLRAVITT YEGKHNHDVP AARGSGSHAV  420
VNRSTADVNV TTAIRPSAMF GRGGGGGSQG QGPFTLEMLQ PQVNYGMVSG YDNAMASYLN  480
HQQQQKHLES VMISKAKDEP KDDLFIESLL C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr09223.1