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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr04182.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | WRKY | ||||||||
Protein Properties | Length: 209aa MW: 22208.7 Da PI: 8.3765 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.2 | 5.4e-31 | 1 | 60 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrC+ a +Cpvkk+v+r+ ed +++++tYeg+Hnh+ Dr04182.1 1 MNDGCQWRKYGQKTAKGNPCPRAYYRCSVAqNCPVKKQVQRCMEDMSILITTYEGNHNHP 60 58**************************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MNDGCQWRKY GQKTAKGNPC PRAYYRCSVA QNCPVKKQVQ RCMEDMSILI TTYEGNHNHP 60 LPFSAATMAS TTSAAASMLM SGSSDSQPQT STTVSAGLHT TTSNTTLLSK ENLITDSIAH 120 AITTDPCFRS ALATAIASYI GVHGAQSRWE SSSAGHGRDQ ERHGAGSVIS SGNNLENLTF 180 SQSLMGFSGA KSASSSPVED RGQYINGMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 3e-40 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr04182.1 |