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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dr01063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 29392.2 Da PI: 10.3501 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.7 | 7.5e-31 | 194 | 251 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+ gC+++k+ver+ edp+++++tYegeH h+ Dr01063.1 194 DEYSWRKYGQKPIKGSPHPRGYYKCSIVrGCTARKHVERCLEDPSMLIVTYEGEHSHT 251 9*************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MEEVVKIHRD AVFSCHGVLD KISQSQNQAL CGTLMAETRE VVSKFKKLGS MLDNTVGHAR 60 FRKLKEAPFP LKMKHNIFLG NQTDLFPKFD AQFLKEKQLN KCQVDMNGVN LKLCSTSMTS 120 AKSLLSSLSV ENHSFGGLNM KSFSLNNLTH KKKCSSRGDV GSINCHCFKK RKLKMRRSIK 180 VPAISHRLAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCSI VRGCTARKHV ERCLEDPSML 240 IVTYEGEHSH TKSLTQSAHP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 172 | KKKCSSRGDVGSINCHCFKKRK |
2 | 152 | 172 | KKCSSRGDVGSINCHCFKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04670.1 | 3e-70 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | Dr01063.1 |