PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz15g15180.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 648aa MW: 69563.5 Da PI: 6.6361

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz15g15180.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.1e-15	4	48	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + T +Edell +av+++G + W+t+a+ ++ gR+ k+c +rw+++l Cz15g15180.t1 4 PITRQEDELLREAVRKYGDRAWATVANDVP-GRSSKSCSDRWRNFL 48 5699************************.***********97 PP
2	Myb_DNA-binding	27.7	6.5e-09	57	96	1	42
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42 + +++++E v+a +++G++ Wk+I+ ++ gRt +k+ Cz15g15180.t1 57 KSPFSEWEVAVVVQAQHRYGNN-WKAISMLLP-GRTNRAVKN 96 579***************99.*****.**99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MLQPITRQED ELLREAVRKY GDRAWATVAN DVPGRSSKSC SDRWRNFLSP DIEHPRKSPF 60 SEWEVAVVVQ AQHRYGNNWK AISMLLPGRT NRAVKNLFVG NLKWGARLPE IRNRYLEQEM 120 SLESLLEIKP DCAGGPPKVH SSQKTNVVCN RAGSTSSAGS AWASDTTDQP LSSTPAGPGS 180 KESNERRKRG EVDVGSNLGH TYQGHQHTKR RRANLAQMGR DGHPEPLPMR SLSLQSQKED 240 PLPVVRPQDS DTADDRGARR ANPVTLDDGS PLGPVTRQHG TPMHSGMPNV GGQGVVTTGP 300 PGRWSMGGDC QTFGHQSMGP MSERGSFKTS PNVTENTDCS ASHGHCWPGP GVAMSDVSRG 360 SDHTAMGRAP GDSIGPTVLA DTGDNIMLQQ MLEQILDEDD CLSDPSISRQ LLLDSPESPG 420 GLLQPHNLGQ SVSADMGMGL MSGVPNSSLA NNPLMRSSTW PQWAAGNDMQ GVQGPDMPPL 480 PPVAGVGSMN PPHGGRVSSH PGQPSGSGLS HHQDDQWWPS AHDADHMDTL NPGNWGGNPP 540 ADNLAGPGPS SALNGGPQPP LQQLLTQHQP QQLMRLLCHQ LQQENMLLMQ RVQNLQDRLA 600 HADATAMPIT PSHQGSNQAA AWGMHGSKSM PAMLDDIDVK MPHGNGI*

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MLQPITRQED ELLREAVRKY GDRAWATVAN DVPGRSSKSC SDRWRNFLSP DIEHPRKSPF  60
SEWEVAVVVQ AQHRYGNNWK AISMLLPGRT NRAVKNLFVG NLKWGARLPE IRNRYLEQEM  120
SLESLLEIKP DCAGGPPKVH SSQKTNVVCN RAGSTSSAGS AWASDTTDQP LSSTPAGPGS  180
KESNERRKRG EVDVGSNLGH TYQGHQHTKR RRANLAQMGR DGHPEPLPMR SLSLQSQKED  240
PLPVVRPQDS DTADDRGARR ANPVTLDDGS PLGPVTRQHG TPMHSGMPNV GGQGVVTTGP  300
PGRWSMGGDC QTFGHQSMGP MSERGSFKTS PNVTENTDCS ASHGHCWPGP GVAMSDVSRG  360
SDHTAMGRAP GDSIGPTVLA DTGDNIMLQQ MLEQILDEDD CLSDPSISRQ LLLDSPESPG  420
GLLQPHNLGQ SVSADMGMGL MSGVPNSSLA NNPLMRSSTW PQWAAGNDMQ GVQGPDMPPL  480
PPVAGVGSMN PPHGGRVSSH PGQPSGSGLS HHQDDQWWPS AHDADHMDTL NPGNWGGNPP  540
ADNLAGPGPS SALNGGPQPP LQQLLTQHQP QQLMRLLCHQ LQQENMLLMQ RVQNLQDRLA  600
HADATAMPIT PSHQGSNQAA AWGMHGSKSM PAMLDDIDVK MPHGNGI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	1e-22	MYB family protein