PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz13g18140.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

C2H2

Protein Properties

Length: 634aa MW: 66416.8 Da PI: 10.0377

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz13g18140.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.0003	449	469	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp Cg+sF +s ++rH +++ Cz13g18140.t1 449 QCPSCGRSF-VPSAYERHVQVC 469 8******.******9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MLTTPAQYDP NKYANPPLYQ ASPAMGTWGS DANHPALVKS GRRAGTSRGG SSEDIVPTSS 60 PSSSAAAAAW SSSTSGGGMM AAAAWQQQDR SQQPLQHNNS EHGASGGHVA RCGRRRSHLG 120 SSESVPSNEQ AVDAITKVRA MLAGWEHPPP PTPLPHQDAD PRTLIKHKGL HSGQGGHTST 180 PSTSTSTSGG GTAGQAQLGY YYPPQPFEHW QGHQQQYQQQ QIQQQYQQQQ APYQMGHKGP 240 APLAWNYARP PASAGMPSSD TFTAMRGQKQ SLAAAVAADS SASYASQQYA SSSDGRPPSQ 300 QRSDGLNKLK QLASARLASR TRTPPAGTEQ GGLLQDPPTM TASPHHQPRH HSDMGTGNAG 360 RPGGEQSIRA GRRSTPSSNQ PKAAAAAAAN PAVHQRPSWQ SAAPEQQPSQ QPDTWHHGAP 420 GATAYGSALG DFAADDDGAA SGANEDRMQC PSCGRSFVPS AYERHVQVCE KVFVNKRKAF 480 NSSQHRLQGT EAAAAVSKAK ASTTQAGRMK PSAAAPNQGR GASQVDRAIP ATAANSKTKW 540 QKQSEQLRAA MRAANPFSGA GGGGYGDAEG GWQPAEEAND RVPCPHCGRK YATDVAERHI 600 PKCADIIAKP AGLKAGGEQQ QRGLGLGFWK VGK*

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MLTTPAQYDP NKYANPPLYQ ASPAMGTWGS DANHPALVKS GRRAGTSRGG SSEDIVPTSS  60
PSSSAAAAAW SSSTSGGGMM AAAAWQQQDR SQQPLQHNNS EHGASGGHVA RCGRRRSHLG  120
SSESVPSNEQ AVDAITKVRA MLAGWEHPPP PTPLPHQDAD PRTLIKHKGL HSGQGGHTST  180
PSTSTSTSGG GTAGQAQLGY YYPPQPFEHW QGHQQQYQQQ QIQQQYQQQQ APYQMGHKGP  240
APLAWNYARP PASAGMPSSD TFTAMRGQKQ SLAAAVAADS SASYASQQYA SSSDGRPPSQ  300
QRSDGLNKLK QLASARLASR TRTPPAGTEQ GGLLQDPPTM TASPHHQPRH HSDMGTGNAG  360
RPGGEQSIRA GRRSTPSSNQ PKAAAAAAAN PAVHQRPSWQ SAAPEQQPSQ QPDTWHHGAP  420
GATAYGSALG DFAADDDGAA SGANEDRMQC PSCGRSFVPS AYERHVQVCE KVFVNKRKAF  480
NSSQHRLQGT EAAAAVSKAK ASTTQAGRMK PSAAAPNQGR GASQVDRAIP ATAANSKTKW  540
QKQSEQLRAA MRAANPFSGA GGGGYGDAEG GWQPAEEAND RVPCPHCGRK YATDVAERHI  600
PKCADIIAKP AGLKAGGEQQ QRGLGLGFWK VGK*