PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz12g20020.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB_related
Protein Properties Length: 180aa    MW: 19952.5 Da    PI: 9.0263
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz12g20020.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.8e-07103148247
                      SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 
                      g WT eE+ l+++  +  G g  W + a+ ++  R ++qc  +++ +
    Cz12g20020.t1 103 GEWTDEEHNLFLKTAQANGAGdKWGLFASFIP-QRVGYQCSAYYREV 148
                      79******************************.9*******999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MTQQQYFQLQ GKELTGFKVD GRFKGWVNPA ICNQYGIAAS AAEAWDSNGG GAFSRKVKAA  60
DIPAHLRSQG WSEARAFSST QLRKNPNAFF YRHVAPHEHQ AMGEWTDEEH NLFLKTAQAN  120
GAGDKWGLFA SFIPQRVGYQ CSAYYREVMI PEGLIVDDQF KLTKEGKAVY VGKPATLVT*