PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz12g10200.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

GATA

Protein Properties

Length: 791aa MW: 80866.5 Da PI: 4.9798

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz12g10200.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	52.3	7.6e-17	169	202	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C +t+Tp+WR+gp g+ktLCnaCG++y++ Cz12g10200.t1 169 CAECAATQTPQWREGPTGPKTLCNACGVRYQRSQ 202 ******************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MHIYLRCSGS DVFEAGGDTD FLGCKSSSAA SFTRQPKTSN GVLGVSNGML PLGLILTHPM 60 GAGARTGPML QSYGMAGLPA LMDQVTAPLH IPQIEDDDDD DALMPGGVSS AALADILQRV 120 QGTGPLQLAS LSNNSDPQVS GSGRSRRMVP QPRPPPAPPS IRGVPGKVCA ECAATQTPQW 180 REGPTGPKTL CNACGVRYQR SQSKAKSNKR LASERRNSPV IRAPAAKQQR IVSGRAGGRM 240 MGSSHGNPSR VVGMGHQAGG FYHEDDGSPP NGSTQILDEE DMEDYNDQGY QIDDDEQPGL 300 LRTKTQEAAD VLSNFRLAAM AGIPPLGTLP ASPGSEGRLL HEQLQVDALP LLHLDDGLRA 360 VDGVPGTPTS TGLPLMDPLQ ANSPSPLVRG RGRGGVRAKE VTTPSPLLGS ITAALDSLGP 420 LQQPPDLPGS LGAPALQLDA PSSSLKTVGV SAGPATAAAA VASAGPSGVG AAGAGQRPNH 480 GAASDESWHT SDSAEEVAFA PGNDATTAAG TSGANGVLGT STGMAASLVL PKTAAMPSSD 540 FQATCSKAVQ FAPELNDYAP VFDSMPRVIN NLPPDRVLDV INLRSQVDVA ANEARAADAA 600 VMAVSQVLHQ KQQQADRAHL SAKSALEQFR EFVVQMIHEY NIDVGNGMLC AAADSNSKGG 660 VVTGDARGAG GSVVSGLLGP DVGALSGVHD AGVKDATAPD DMLVDPEEVK QEEQNQAAEL 720 DTTEQPVANG TIGSKLPVSG KLGPAGLQKL QMKYKQENGA MVNGKAVDMQ PSSSSAPAAC 780 PGAGTTQVAA *

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MHIYLRCSGS DVFEAGGDTD FLGCKSSSAA SFTRQPKTSN GVLGVSNGML PLGLILTHPM  60
GAGARTGPML QSYGMAGLPA LMDQVTAPLH IPQIEDDDDD DALMPGGVSS AALADILQRV  120
QGTGPLQLAS LSNNSDPQVS GSGRSRRMVP QPRPPPAPPS IRGVPGKVCA ECAATQTPQW  180
REGPTGPKTL CNACGVRYQR SQSKAKSNKR LASERRNSPV IRAPAAKQQR IVSGRAGGRM  240
MGSSHGNPSR VVGMGHQAGG FYHEDDGSPP NGSTQILDEE DMEDYNDQGY QIDDDEQPGL  300
LRTKTQEAAD VLSNFRLAAM AGIPPLGTLP ASPGSEGRLL HEQLQVDALP LLHLDDGLRA  360
VDGVPGTPTS TGLPLMDPLQ ANSPSPLVRG RGRGGVRAKE VTTPSPLLGS ITAALDSLGP  420
LQQPPDLPGS LGAPALQLDA PSSSLKTVGV SAGPATAAAA VASAGPSGVG AAGAGQRPNH  480
GAASDESWHT SDSAEEVAFA PGNDATTAAG TSGANGVLGT STGMAASLVL PKTAAMPSSD  540
FQATCSKAVQ FAPELNDYAP VFDSMPRVIN NLPPDRVLDV INLRSQVDVA ANEARAADAA  600
VMAVSQVLHQ KQQQADRAHL SAKSALEQFR EFVVQMIHEY NIDVGNGMLC AAADSNSKGG  660
VVTGDARGAG GSVVSGLLGP DVGALSGVHD AGVKDATAPD DMLVDPEEVK QEEQNQAAEL  720
DTTEQPVANG TIGSKLPVSG KLGPAGLQKL QMKYKQENGA MVNGKAVDMQ PSSSSAPAAC  780
PGAGTTQVAA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26930.1	5e-14	GATA family protein