PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz12g02200.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

HB-other

Protein Properties

Length: 677aa MW: 74182.1 Da PI: 6.8094

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz12g02200.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.1	9.6e-06	261	316	3	54
--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRak 54 kR +ftk+ql++L +l + + +s+++++ ++lg+++++ ++F Nr+ k Cz12g02200.t1 261 KRKRFTKQQLDALTQLADstnwSLQAISQADKQAFCEQLGISKERMHNFFNNRKPK 316 7999**********99665557999************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MDLRLMFDGT RHASKLSGLV SSHKFTEVSI EQLRRVQQMF AEDRDWQQFH TPRNLLLALV 60 GEVGELSEIF QWRGEVPVGL TTFTPADKQH VAEELSDVLL YLVRLADRCH IDLGRAVLDK 120 VAKNVAKYPM DKCKGSAAKY TAYQQQPCAT GAMQSHTTAT ATAVGAASFE PFATPTAVAV 180 DAAATAQAIE RLWAGRPNIM DRALLQVAFM GLDKAQSTAH QQNASPTLQT AAAAAAGAAD 240 GVTEHGCSPS NGTPVFDTSL KRKRFTKQQL DALTQLADST NWSLQAISQA DKQAFCEQLG 300 ISKERMHNFF NNRKPKDLKK PRLAVSGNGG CQMYHGTRDQ RLSQLGNYDN QCKESSRTGS 360 GECHEGEIVG DGSRNSHSSD ADPADISSSR PNYPRVLRLP IAQHRGEVLS PGELNVQGGG 420 KSHHACQHSI SPGGSWGCRS AQPGWCTAID SVPGGLWCSA GRGSTATPRV EVATDSQPCA 480 CQSPLQQSDY DDQQHQQQKH EGKHSNQQRQ HQQYEDKQLY HQQQQNQKQQ QHQQHQQQQQ 540 LQEDDNVQPT SSTVAYEYAG SEALMHLLRL IKHATASSNH LMSEQETEAP KSPAAADDNI 600 SSTPGIHKEL VLDVHMLKHL VQQLHNRRSQ VAGDHDAGSD SIQDNSHQHP EQPSKHTETN 660 MQVVEAESQQ IKTEGS*

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MDLRLMFDGT RHASKLSGLV SSHKFTEVSI EQLRRVQQMF AEDRDWQQFH TPRNLLLALV  60
GEVGELSEIF QWRGEVPVGL TTFTPADKQH VAEELSDVLL YLVRLADRCH IDLGRAVLDK  120
VAKNVAKYPM DKCKGSAAKY TAYQQQPCAT GAMQSHTTAT ATAVGAASFE PFATPTAVAV  180
DAAATAQAIE RLWAGRPNIM DRALLQVAFM GLDKAQSTAH QQNASPTLQT AAAAAAGAAD  240
GVTEHGCSPS NGTPVFDTSL KRKRFTKQQL DALTQLADST NWSLQAISQA DKQAFCEQLG  300
ISKERMHNFF NNRKPKDLKK PRLAVSGNGG CQMYHGTRDQ RLSQLGNYDN QCKESSRTGS  360
GECHEGEIVG DGSRNSHSSD ADPADISSSR PNYPRVLRLP IAQHRGEVLS PGELNVQGGG  420
KSHHACQHSI SPGGSWGCRS AQPGWCTAID SVPGGLWCSA GRGSTATPRV EVATDSQPCA  480
CQSPLQQSDY DDQQHQQQKH EGKHSNQQRQ HQQYEDKQLY HQQQQNQKQQ QHQQHQQQQQ  540
LQEDDNVQPT SSTVAYEYAG SEALMHLLRL IKHATASSNH LMSEQETEAP KSPAAADDNI  600
SSTPGIHKEL VLDVHMLKHL VQQLHNRRSQ VAGDHDAGSD SIQDNSHQHP EQPSKHTETN  660
MQVVEAESQQ IKTEGS*