PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz11g29090.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

Nin-like

Protein Properties

Length: 844aa MW: 85472.8 Da PI: 7.1988

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz11g29090.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	67.8	1.7e-21	103	151	3	51
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++i+ e+l++yF+lp ++AA Lgv+lTvLK+ CR+yG++RWP+R ks Cz11g29090.t1 103 SDITKEELAQYFNLPSEEAAARLGVGLTVLKKLCRKYGVPRWPYRLRKS 151 689******************************************7666 PP

Sequence ? help Back to Top
Protein Sequence Length: 844 aa Download sequence
MTMALTSAAS GHSSAVAPVT CAATVGLLGW QQPVFAHNGA IHTLMGPAVL MPPELQAAAA 60 EVPAVMAAVG KTAAVDTSVA GGDSSPATKR TNKKRSKGGR VASDITKEEL AQYFNLPSEE 120 AAARLGVGLT VLKKLCRKYG VPRWPYRLRK SVEKLINNLE SGVSPGDTAR HLLKNEQEVH 180 ELKSKLTSGD VFQVDDSTKK LQQAYSKHAH KIRKLSGKSA EDGSGGPAPR RSRAAKNVDP 240 TTVDPNSLTP SQLNNSNIPA AVVAGTPTAT TSLHGMTQPL HSFQPHAAYP TLWQIQSGMP 300 ITTSAGSTIP SLPSVLTAQD RTAATAAVAA AAGLAAQLGA HTYVPSTSLG TANSSVAWPS 360 VPASAVAAMS AHMLAAGLVA GDAPWPAVSA AAAAGGGGSM HIMQAPTGPA VAGQQQHAFP 420 PLLVGSLQQQ LQPQPQPQLQ PHCMQHSALP MPSSLSLPAA PLQHQNDMCQ VLDVVSQADA 480 GQQLPSTGYH CMVNMPDHMM AAKVNGHLLL DAATGQPGLS PVLLSPHLPV TAAQTSAQLA 540 QPVLHTTPIS NTLNIPLPPS DAPSLAPAAL AVDPQAAVAA AAVAVAGITH QAHLLAASSG 600 LRPPVSMLTM SASLPAATAQ GSDTAGSTVS TYAAPVLCPP LAQPLQHSCA AGDSSNTACV 660 AINQPEHCHP PPPPLASATH HQPGQPVEST PAGGAAEDPH SVAQVLMHMA VGVGGDVQAD 720 SGQGTATVVP STTSSASAPH GSSTTATPDQ AGSVGALTEA QAYATLQHRA FQLGRAVFGA 780 VLSPLPGPVG TCVQLPPLPA GSAASDEEVL AHLQVVALRS GHVAQDIQLS HLVSEHNHLQ 840 GHS*

Sequence ? help Back to Top

Protein Sequence Length: 844 aa Download sequence

MTMALTSAAS GHSSAVAPVT CAATVGLLGW QQPVFAHNGA IHTLMGPAVL MPPELQAAAA  60
EVPAVMAAVG KTAAVDTSVA GGDSSPATKR TNKKRSKGGR VASDITKEEL AQYFNLPSEE  120
AAARLGVGLT VLKKLCRKYG VPRWPYRLRK SVEKLINNLE SGVSPGDTAR HLLKNEQEVH  180
ELKSKLTSGD VFQVDDSTKK LQQAYSKHAH KIRKLSGKSA EDGSGGPAPR RSRAAKNVDP  240
TTVDPNSLTP SQLNNSNIPA AVVAGTPTAT TSLHGMTQPL HSFQPHAAYP TLWQIQSGMP  300
ITTSAGSTIP SLPSVLTAQD RTAATAAVAA AAGLAAQLGA HTYVPSTSLG TANSSVAWPS  360
VPASAVAAMS AHMLAAGLVA GDAPWPAVSA AAAAGGGGSM HIMQAPTGPA VAGQQQHAFP  420
PLLVGSLQQQ LQPQPQPQLQ PHCMQHSALP MPSSLSLPAA PLQHQNDMCQ VLDVVSQADA  480
GQQLPSTGYH CMVNMPDHMM AAKVNGHLLL DAATGQPGLS PVLLSPHLPV TAAQTSAQLA  540
QPVLHTTPIS NTLNIPLPPS DAPSLAPAAL AVDPQAAVAA AAVAVAGITH QAHLLAASSG  600
LRPPVSMLTM SASLPAATAQ GSDTAGSTVS TYAAPVLCPP LAQPLQHSCA AGDSSNTACV  660
AINQPEHCHP PPPPLASATH HQPGQPVEST PAGGAAEDPH SVAQVLMHMA VGVGGDVQAD  720
SGQGTATVVP STTSSASAPH GSSTTATPDQ AGSVGALTEA QAYATLQHRA FQLGRAVFGA  780
VLSPLPGPVG TCVQLPPLPA GSAASDEEVL AHLQVVALRS GHVAQDIQLS HLVSEHNHLQ  840
GHS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	1e-20	Nin-like family protein