PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz11g08060.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

GATA

Protein Properties

Length: 1993aa MW: 208845 Da PI: 4.8475

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz11g08060.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	35.3	1.6e-11	1382	1416	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cgt +p+WR+g ++ LCnaCG++ r++++ Cz11g08060.t1 1382 CCHCGTNYSPQWRKGTPEKPILCNACGIRLRRHKR 1416 99***********955555*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 1993 aa Download sequence
MSEYDTDIWA ELLSEPLCPD LTDDDGLAGS VPRAGEPCAA QRHTKSPSIM QAKAASAATS 60 KQAPIHHAGA EQASIGAAKP MERAGADSGG MDEAWQPSDV PCLPQQHSSL NAAPPKQQVS 120 AVPQPACFVA SEAEVVATPV VPLSYTDPLS SADQLEQTFS PMSTAQPVVT AHRDNISSTI 180 DSAHDVVARV QAQAQSIRQH PTVILTSQST APERAHGVAP LLPQADVMTG SGLLAEPTCS 240 AALPGGIQAV DRLHMPASAA QGQTPTTDLD VQPSTVLSAA ALPSNPPVAP AEGQKAASGL 300 AAGKPVAKDM QVDPDMSFLP SNIPYQPQSL LTASSGMVLV MPQTVMSVCQ GVAPSQLQGQ 360 AVASTNGATQ LMLTQLPLML PLHSAMTGVQ SPSAVAAGSL AVQLPLQVHQ YANEYVAQLA 420 TLLSMVNGSY AKLLDSKHVP SVAGVQQTAV LTGGATVSHS SKQQLDDAHM PPVSKAMHAE 480 GARSLAADGK APSTLAFDAN AARAIQLLVS LQGATEPAIA ANASCAGDAT ECADLGLQLS 540 PNSDSLDCNH HTAEAVANNV GSSSRLPTDT AANSAAAGLC ASSKESEQAA LGKSVKQPKW 600 MGSACTTADA LGRSRRGRSI KRPSWMLDHI EVRSAGKKVC KVGAAAIKAV AGSQQQPMSE 660 QQADTIATVN QPQSPAVAHG PDEHEGALAG DVDMTEQQQD EQQHQQRKEG HSAVAFQTDT 720 PANQLAPGKQ GCTDAGQLQP VVDSAEQQQQ AALPQSMNQT CDSMSGGCGR PAVDDSLQEV 780 IAVVQDSNRT SAGVDAAASP ALHDSGEATV STAAIDAAAD MKCAYCIIQH VSEAELADCP 840 AALAASQPGD TKEQQQGCLM PAAAKAPQEI QQQDVAAEAV HVTYSHVLDM GTGSMSLEEV 900 TNVHMNLNRK KLPFETKMCV VAADAHEPGA QNVMQTEVAG VTTMVAGDLL GGYAVAAARD 960 GAAASAQGTV PVRAEDEAGM CVDVAAFLHP DGPESGEHAI KADDATCRGQ NDIMCYEKAD 1020 VAAGSDTDMA AVSDADADVY KEVKATESNA HGLLWEDNDH GLSGFWGSDT KQDLSSLWIK 1080 DSPHALEPLW VPEAALGLAG TQDDICLTQQ HDVGQQQGFW GERCDTELGN EGQRVKLEEE 1140 QQEQHLGFPA CTSTQPAIET CEDPLQQTDE EEEPSCMQHD ADQQAQFADQ GWRGTWQQTS 1200 EGNVHPAAFQ GLNHHPPMSC QHDEGPGDML VDSQGGLKHE FADQQIPVHY AAAVEHYRSD 1260 DSGPDDDMPA QQLHVMGRQQ RPMSSHHVEG LGFASSFSEE LEQLEDEAQE CHRACGYDRA 1320 CQPVYGRMGR LGHQSSFAGR HARGKHHRPD EYKPHRGEPK RDAKAAGPKR HSNGKAELAG 1380 PCCHCGTNYS PQWRKGTPEK PILCNACGIR LRRHKRLEPC NPTGGEGPGC VADVHGIQGA 1440 GSSGSASCQQ GLNGKWQLRS HGSRSTQHSK QQAVESLQRT RPLSLRLQRR AQEGKSVSPA 1500 KLELDDDLDE PASPRRKYHP ATASVKLQQC RPTPYLSIPI PRNAAKRMQV PSPGSRLPPQ 1560 GFRERHSSPR QASPAAEQVV IWTASGLPPS GNQLGLRGRH ASLSPMCRQM PKSTRAGLAV 1620 NKAEERDTAM LQHPARNNGQ QAMLLTSINA VDIHGSDMNA LTAVPATACH VSAGCVASIE 1680 NQPQDQISNS QLLYNDPDSP FSVYGNDMEP VQQSMDEESS GQWSSGMTPS CLVARPYSVS 1740 SDNLQDSADT HVAWNADALY CEDMGRDGLM CGSKPAALTS MSSGALTGQL SVEISPTAEQ 1800 LVGAFPCDQS MIAAAACRPG GVASRLYTAG SDADVGFNSD LAWDQPEASA QGLAAADGQL 1860 PASGLHALTE LDNQAHHGLP EFGHNAMVLG GAGYGRSDMF IVVGGGNGGV SSKAGDMVEG 1920 LGGCELGTCQ DAAVAGSPES AECESMQVYG IDNGSGDLVN GITSQAFNQC GQCSKHVPAG 1980 YMHPLCDACR WV*

Sequence ? help Back to Top

Protein Sequence Length: 1993 aa Download sequence

MSEYDTDIWA ELLSEPLCPD LTDDDGLAGS VPRAGEPCAA QRHTKSPSIM QAKAASAATS  60
KQAPIHHAGA EQASIGAAKP MERAGADSGG MDEAWQPSDV PCLPQQHSSL NAAPPKQQVS  120
AVPQPACFVA SEAEVVATPV VPLSYTDPLS SADQLEQTFS PMSTAQPVVT AHRDNISSTI  180
DSAHDVVARV QAQAQSIRQH PTVILTSQST APERAHGVAP LLPQADVMTG SGLLAEPTCS  240
AALPGGIQAV DRLHMPASAA QGQTPTTDLD VQPSTVLSAA ALPSNPPVAP AEGQKAASGL  300
AAGKPVAKDM QVDPDMSFLP SNIPYQPQSL LTASSGMVLV MPQTVMSVCQ GVAPSQLQGQ  360
AVASTNGATQ LMLTQLPLML PLHSAMTGVQ SPSAVAAGSL AVQLPLQVHQ YANEYVAQLA  420
TLLSMVNGSY AKLLDSKHVP SVAGVQQTAV LTGGATVSHS SKQQLDDAHM PPVSKAMHAE  480
GARSLAADGK APSTLAFDAN AARAIQLLVS LQGATEPAIA ANASCAGDAT ECADLGLQLS  540
PNSDSLDCNH HTAEAVANNV GSSSRLPTDT AANSAAAGLC ASSKESEQAA LGKSVKQPKW  600
MGSACTTADA LGRSRRGRSI KRPSWMLDHI EVRSAGKKVC KVGAAAIKAV AGSQQQPMSE  660
QQADTIATVN QPQSPAVAHG PDEHEGALAG DVDMTEQQQD EQQHQQRKEG HSAVAFQTDT  720
PANQLAPGKQ GCTDAGQLQP VVDSAEQQQQ AALPQSMNQT CDSMSGGCGR PAVDDSLQEV  780
IAVVQDSNRT SAGVDAAASP ALHDSGEATV STAAIDAAAD MKCAYCIIQH VSEAELADCP  840
AALAASQPGD TKEQQQGCLM PAAAKAPQEI QQQDVAAEAV HVTYSHVLDM GTGSMSLEEV  900
TNVHMNLNRK KLPFETKMCV VAADAHEPGA QNVMQTEVAG VTTMVAGDLL GGYAVAAARD  960
GAAASAQGTV PVRAEDEAGM CVDVAAFLHP DGPESGEHAI KADDATCRGQ NDIMCYEKAD  1020
VAAGSDTDMA AVSDADADVY KEVKATESNA HGLLWEDNDH GLSGFWGSDT KQDLSSLWIK  1080
DSPHALEPLW VPEAALGLAG TQDDICLTQQ HDVGQQQGFW GERCDTELGN EGQRVKLEEE  1140
QQEQHLGFPA CTSTQPAIET CEDPLQQTDE EEEPSCMQHD ADQQAQFADQ GWRGTWQQTS  1200
EGNVHPAAFQ GLNHHPPMSC QHDEGPGDML VDSQGGLKHE FADQQIPVHY AAAVEHYRSD  1260
DSGPDDDMPA QQLHVMGRQQ RPMSSHHVEG LGFASSFSEE LEQLEDEAQE CHRACGYDRA  1320
CQPVYGRMGR LGHQSSFAGR HARGKHHRPD EYKPHRGEPK RDAKAAGPKR HSNGKAELAG  1380
PCCHCGTNYS PQWRKGTPEK PILCNACGIR LRRHKRLEPC NPTGGEGPGC VADVHGIQGA  1440
GSSGSASCQQ GLNGKWQLRS HGSRSTQHSK QQAVESLQRT RPLSLRLQRR AQEGKSVSPA  1500
KLELDDDLDE PASPRRKYHP ATASVKLQQC RPTPYLSIPI PRNAAKRMQV PSPGSRLPPQ  1560
GFRERHSSPR QASPAAEQVV IWTASGLPPS GNQLGLRGRH ASLSPMCRQM PKSTRAGLAV  1620
NKAEERDTAM LQHPARNNGQ QAMLLTSINA VDIHGSDMNA LTAVPATACH VSAGCVASIE  1680
NQPQDQISNS QLLYNDPDSP FSVYGNDMEP VQQSMDEESS GQWSSGMTPS CLVARPYSVS  1740
SDNLQDSADT HVAWNADALY CEDMGRDGLM CGSKPAALTS MSSGALTGQL SVEISPTAEQ  1800
LVGAFPCDQS MIAAAACRPG GVASRLYTAG SDADVGFNSD LAWDQPEASA QGLAAADGQL  1860
PASGLHALTE LDNQAHHGLP EFGHNAMVLG GAGYGRSDMF IVVGGGNGGV SSKAGDMVEG  1920
LGGCELGTCQ DAAVAGSPES AECESMQVYG IDNGSGDLVN GITSQAFNQC GQCSKHVPAG  1980
YMHPLCDACR WV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.1	8e-10	GATA family protein