PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz09g22270.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family NF-YC
Protein Properties Length: 418aa    MW: 42661.4 Da    PI: 9.3024
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz09g22270.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC37.64.7e-126832197
          NF-YC 21 lPl.arikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97
                   +Pl arik+++++dedv +is  +Pv++++a elf+ +l   +   a     +t+  s +++ v + +  df  d v 
  Cz09g22270.t1  6 YPLaARIKRLMQTDEDVGKISQATPVMIARAMELFLQKLCENASKIASARGAKTVSTSHLKSYVLSDELMDFCKDAVA 83
                   67736**********************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MGKKPYPLAA RIKRLMQTDE DVGKISQATP VMIARAMELF LQKLCENASK IASARGAKTV  60
STSHLKSYVL SDELMDFCKD AVASAPDLPA DESETPKVKR QRVESKPRAP RVSSGGDVAA  120
TPAAALVTMG STGLGSPKAS SSHAKPAKAE LTASATTATG TASTAPVNAA QTAHGGAFTG  180
LTANHPLLGS RGFGQRLGSG GSLGAASKAH SAQTASNKPD IMESASTDAK QPNKTSHQQS  240
AQPQERSTDA AAAGHVQLQP PALQSKRHLQ QKANKMQSPS TPKTAEPGAQ GKQLELKPEA  300
SGAAATGVVN GEQAGPSANK QQTAKVSSSH SNTQQPSSSK TEAGQPSITR AEQPQPAGDE  360
ANEAAAATPP VQSAFAPAAQ TAKEEQPQLP LAGMLSMAAL ASFGSVANDD YDDDYDS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197102KVKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19490.13e-24NF-YC family protein