PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz08g02090.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB_related
Protein Properties Length: 272aa    MW: 29271.2 Da    PI: 6.7053
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz08g02090.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.63.3e-142872147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++++  +Ed  +v+a+  lG++ W+ Iar+++ gRt++ +k+rw++ 
    Cz08g02090.t1 28 KDPFDDWEDAVIVEAHGPLGNR-WSDIARMLP-GRTDNAVKNRWNST 72
                     67899*****************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MIASQLRGRS GKSCRLRWWN HLSPEVKKDP FDDWEDAVIV EAHGPLGNRW SDIARMLPGR  60
TDNAVKNRWN STLKRLAGTP AKRAKYLQKT RHKSLNEATK QGSQGPPRKK ACQMTDTNNS  120
APPLLEPPVP DHCMNLISSS GGPLASLLAF TDGDIPEDIS PVAGGCDIHG DVPYEAQMPV  180
IAAIPTATSP TASMQYSTES DDMDLDALSN VSFIPGGDMM GSDLIGSFQV AVCWHAARVS  240
VLLNPCQLAD NVCARHALDT GSIHTTVLGM F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.18e-28MYB family protein