PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz06g25100.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

YABBY

Protein Properties

Length: 863aa MW: 92403.9 Da PI: 9.4635

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz06g25100.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	28.6	4.5e-09	696	789	72	165
YABBY 72 leelkveeenlksnvekeesastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 ++ + ++e+++++ ++ s s+ ++s++ +++++ +++ +P +rv ay f++ + q++ snP ++ f +aak Wa +P+ Cz06g25100.t1 696 KQGMPSSESKVTKSSSTIASGSKARASSR-AASNSRNRQKALGvNEKPTAGTKRVLNAYQLFVQTNRQQLLQSNPGTVSKDVFGLAAKAWATLPD 789 22222222222222222222222222222.3333344444444145888899****************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MRTDGVTLSH EAVAQLRDVA SSSYGHDYIP PSPRMYKSKI KNAQEAHEAI RPTKPWLSPA 60 QLPSGLSKDQ VRLYDLIWRR ALACQMSNAE IQQVGVDASS TDGSLVLRAT GSSISFPGYL 120 RVYDDDDQTA KASEGEAVAS STDDVADEAV ATTAFTEVLV KLNAGDVLSS TAVMPDQHYT 180 KPPPRFTEAS LVKALEEGGI GRPSTYASIM KLLVDRGYVI REGRALVPQP LGRLLTAFLH 240 QYFARYVDYN FTSQLEEQLD DVSGGRLQWK ALMKDFWGPF ADQASSVSKV SQTDVYNMLD 300 AALEPFLFTP KDDGIDPRKC PACGGRLVLK PSKMGAFIGC SNFSNERIAC KYTQSIFQDD 360 DDEGFISRSD DDEDHHGGEN NGAGVLVNVR ILGVDPSTGQ PVFIKKGPYG LYLQLGDGTD 420 SSCDVRRSAL PKTATFTNVT LQQALHQLAL PRTLGSHPGD GEPIIANTGR FGPYIQHKTL 480 CVALPQGVDA RSITAHEALT LMEAKVAARI KRGREPYPLP KAKKSSQAKK GSKKDTTAAQ 540 NSIRTSSSKA SSPSSRMKSR QSKSSGNSTT SSSSKTSISK PRALTGYQLF AKLNKQQLLE 600 SNSGSSSSSS SNGSSSGSSS GKHFLSLAAN AWKLLNEEDK EQYKTMAKEH ADTNQQQLAA 660 ANESEALSTV APRALTKQVD KDGTQKRSYS TASSAKQGMP SSESKVTKSS STIASGSKAR 720 ASSRAASNSR NRQKALGVNE KPTAGTKRVL NAYQLFVQTN RQQLLQSNPG TVSKDVFGLA 780 AKAWATLPDG DKEGYRQLAA DTAAGRGDSS QGASQNSGTV ADIGQVDTNG RHSSSNGSSG 840 HEVLSSFSLS PPEVLVGQHQ QR*

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MRTDGVTLSH EAVAQLRDVA SSSYGHDYIP PSPRMYKSKI KNAQEAHEAI RPTKPWLSPA  60
QLPSGLSKDQ VRLYDLIWRR ALACQMSNAE IQQVGVDASS TDGSLVLRAT GSSISFPGYL  120
RVYDDDDQTA KASEGEAVAS STDDVADEAV ATTAFTEVLV KLNAGDVLSS TAVMPDQHYT  180
KPPPRFTEAS LVKALEEGGI GRPSTYASIM KLLVDRGYVI REGRALVPQP LGRLLTAFLH  240
QYFARYVDYN FTSQLEEQLD DVSGGRLQWK ALMKDFWGPF ADQASSVSKV SQTDVYNMLD  300
AALEPFLFTP KDDGIDPRKC PACGGRLVLK PSKMGAFIGC SNFSNERIAC KYTQSIFQDD  360
DDEGFISRSD DDEDHHGGEN NGAGVLVNVR ILGVDPSTGQ PVFIKKGPYG LYLQLGDGTD  420
SSCDVRRSAL PKTATFTNVT LQQALHQLAL PRTLGSHPGD GEPIIANTGR FGPYIQHKTL  480
CVALPQGVDA RSITAHEALT LMEAKVAARI KRGREPYPLP KAKKSSQAKK GSKKDTTAAQ  540
NSIRTSSSKA SSPSSRMKSR QSKSSGNSTT SSSSKTSISK PRALTGYQLF AKLNKQQLLE  600
SNSGSSSSSS SNGSSSGSSS GKHFLSLAAN AWKLLNEEDK EQYKTMAKEH ADTNQQQLAA  660
ANESEALSTV APRALTKQVD KDGTQKRSYS TASSAKQGMP SSESKVTKSS STIASGSKAR  720
ASSRAASNSR NRQKALGVNE KPTAGTKRVL NAYQLFVQTN RQQLLQSNPG TVSKDVFGLA  780
AKAWATLPDG DKEGYRQLAA DTAAGRGDSS QGASQNSGTV ADIGQVDTNG RHSSSNGSSG  840
HEVLSSFSLS PPEVLVGQHQ QR*