PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz03g37200.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 951aa MW: 98839.1 Da PI: 4.7914

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz03g37200.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.7	2e-11	561	609	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 grW+++E +l++ +vkq G g Wk++ ++ ++R+ ++k++w+++ Cz03g37200.t1 561 GRWSQQETDLFITLVKQIGRGKWKRVLEMSDgqlTHRSQVDLKDKWRNL 609 8**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 951 aa Download sequence
MGLCLANVWW YEHLLSMPDV PDEIIHHFGT KFPAAPSNGQ LGMPAPVCAR LFYRHLMKQP 60 DVVTSQDTLE IFGFLHGLTS HFPHHFRHTT NLQHITPPVG LMIKTALQVL IHTQLHHGLQ 120 ARHAAQLQSR LRVMLETAQL RMLVNNEELN SRLQQLQDII AACDDLTVLP RLLTDEYSDT 180 PVLRDIRAYA TSAWAALGPT YLEEHEADMM MSSGSCKAIT NTWYGQCGRQ QHETATTTQA 240 VAPTARPTTD PTQPAPAQTQ VAVATAYQDV HVPPPVAATA ATAAATAAAA TAATTPVICS 300 TSCPASTAVS NSTTHNMAAA SPDMLPAVPS PITSSPPPLM AVVPPLSSPQ AVASSPVAVK 360 RAARTGKRKR TSAAVCRTSA AACTTSSVLN DRPEEHNNDA FAAATASGPA ILQLPQLVPA 420 AAAQHLSDDE IDAATAPDTT MHVQTDQDDA YAPMTHDDAT PGMSSDQLVP PVATATMMDA 480 ATSGAVAQQP EHAASAADCT TTTPVNIIAG KKGKKSRTVQ WDSPSAPNTA PQSSDVSPSH 540 QGATAAATAS GSSRQPRRKV GRWSQQETDL FITLVKQIGR GKWKRVLEMS DGQLTHRSQV 600 DLKDKWRNLE KQGMVPKDYP LDPHGSGELQ GSQGDQQEQQ GGSGIDDISP GGAEAGVFED 660 PLSGVAGQQG LNGDLMSGGE EGVSVLGQSQ LARGINDGFA DMVGADILGE GVVGGVSAGG 720 LLPGDDVEMS GEMVIPVSMG LPLATQTADG GLSEMTNTPL TSFSMPSVPD ITLAPQGLVV 780 EGLDVEGVNQ TVIPPPAVSM PAEGQPAVLL SSDTAPPITH AIPPRMPNIT MMDVATGLPA 840 TAIAETGSMT LPLAAASAVR LPATTGHQID TADTPSQQAV AGSFDQAAIA DESAPSPKLE 900 DMVSLAGIHQ QGGMDAGVAP TAGGVQAIAA MEDSPVAYAT YYTTHGSMAL *

Sequence ? help Back to Top

Protein Sequence Length: 951 aa Download sequence

MGLCLANVWW YEHLLSMPDV PDEIIHHFGT KFPAAPSNGQ LGMPAPVCAR LFYRHLMKQP  60
DVVTSQDTLE IFGFLHGLTS HFPHHFRHTT NLQHITPPVG LMIKTALQVL IHTQLHHGLQ  120
ARHAAQLQSR LRVMLETAQL RMLVNNEELN SRLQQLQDII AACDDLTVLP RLLTDEYSDT  180
PVLRDIRAYA TSAWAALGPT YLEEHEADMM MSSGSCKAIT NTWYGQCGRQ QHETATTTQA  240
VAPTARPTTD PTQPAPAQTQ VAVATAYQDV HVPPPVAATA ATAAATAAAA TAATTPVICS  300
TSCPASTAVS NSTTHNMAAA SPDMLPAVPS PITSSPPPLM AVVPPLSSPQ AVASSPVAVK  360
RAARTGKRKR TSAAVCRTSA AACTTSSVLN DRPEEHNNDA FAAATASGPA ILQLPQLVPA  420
AAAQHLSDDE IDAATAPDTT MHVQTDQDDA YAPMTHDDAT PGMSSDQLVP PVATATMMDA  480
ATSGAVAQQP EHAASAADCT TTTPVNIIAG KKGKKSRTVQ WDSPSAPNTA PQSSDVSPSH  540
QGATAAATAS GSSRQPRRKV GRWSQQETDL FITLVKQIGR GKWKRVLEMS DGQLTHRSQV  600
DLKDKWRNLE KQGMVPKDYP LDPHGSGELQ GSQGDQQEQQ GGSGIDDISP GGAEAGVFED  660
PLSGVAGQQG LNGDLMSGGE EGVSVLGQSQ LARGINDGFA DMVGADILGE GVVGGVSAGG  720
LLPGDDVEMS GEMVIPVSMG LPLATQTADG GLSEMTNTPL TSFSMPSVPD ITLAPQGLVV  780
EGLDVEGVNQ TVIPPPAVSM PAEGQPAVLL SSDTAPPITH AIPPRMPNIT MMDVATGLPA  840
TAIAETGSMT LPLAAASAVR LPATTGHQID TADTPSQQAV AGSFDQAAIA DESAPSPKLE  900
DMVSLAGIHQ QGGMDAGVAP TAGGVQAIAA MEDSPVAYAT YYTTHGSMAL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17460.1	1e-08	MYB_related family protein