PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g38280.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

Nin-like

Protein Properties

Length: 1093aa MW: 115847 Da PI: 6.309

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g38280.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	64.1	2.2e-20	980	1028	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ + l++ ++lpi AA +L+v+ TvLK+ CR+++I+RWP+Rki+sl Cz02g38280.t1 980 IITKNSLREVYHLPISRAAAHLDVGSTVLKKYCRKFNIQRWPYRKINSL 1028 58999******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1093 aa Download sequence
MQASSARSNS CLSPRLQRVV AALPKMGHVP SPTSVHVPPP PADDFDFLAL LGDGDLFKEV 60 QNLSDLFDLE SSDGVGESLD ACAHRYDDTW LQDASLLETL SSPASDPNSS SIPYGQPHAH 120 HAAEGRILSS LAHTGLQHGT AHDLGVGVSS GTSVPPWQQL HTSLSNAASH FLNGSSLLCS 180 HGLEILPATS QYGATPHDHD STVQLPQMSA CLQLAHQPSC IQLQQGQGQM GLVAPAQPVH 240 SFQLPQIPND WAMGMDHLTA VPEHLLRSGP TSEVQWQGPS QACNGMPANR PLPGLYQLDP 300 LQADTSAGVC GPHQQLLTCP DDMLGMCLLS IQPHQEQQDQ PIGTVFDTAS STVGLQAAAS 360 TGFPDYSMMS VSTNSQGPSA CASASDALQT PKAPLLLTYP GSLEPSTHMP INMTQLSLAA 420 DAPDAGLSNS QLPAVPTTHG DMPADQAHQP TKRSKGQRRQ KDVKPEVIAL SVDDVKHIVL 480 TEPPEPMYPE VLEVFDMTSF TPAAAARKAA EMSEACGQQL KKAKRALNLK VAVCQYGNHM 540 KESGQSLPAE QEDSLKLIDQ IQEQHPEWLV NPAKAPPEVA QCILNLKRYW ATIQKKQADK 600 EHEDHLAKAH TSSSTACIAV KAPGDAANAE VLADTNAAAD DADADAEVKE PVFAALRDFN 660 CCQSKSLSSR TVAKVRKRLS CGHAANGAAG HLHPAAPAAA TDATATAVIT LRNANHEDSH 720 VAHAPCGRLV GGSSSAVQDG CESLNSHGAA TAQAQLEQQV VQHQSHGEPP AFGTAAPPAE 780 SQLPNCAAGH AAHDDTSGMT NHPPTSCRCP QTAAHLSDVD AVVTVVKKPR RRSMAVTATA 840 ADGNTTAATV AAATTAGGCS GGTAACGTGA VQSRSASPVS TAKPKSSGLS GTSEANEVIP 900 HSRPRRQIRR PVALSDCSSE TLGSSFGDED HNSIQDSDSA VEHQQHLDDA DLDDLDCSSD 960 DDGDKRHPIR AHGKGSKARI ITKNSLREVY HLPISRAAAH LDVGSTVLKK YCRKFNIQRW 1020 PYRKINSLHK LIDAVEGYEK SSGNTRQCAP VLQELRLFLD MTKEDPNIEL DARIKNLRQV 1080 IFKQEYKARQ HA*

Sequence ? help Back to Top

Protein Sequence Length: 1093 aa Download sequence

MQASSARSNS CLSPRLQRVV AALPKMGHVP SPTSVHVPPP PADDFDFLAL LGDGDLFKEV  60
QNLSDLFDLE SSDGVGESLD ACAHRYDDTW LQDASLLETL SSPASDPNSS SIPYGQPHAH  120
HAAEGRILSS LAHTGLQHGT AHDLGVGVSS GTSVPPWQQL HTSLSNAASH FLNGSSLLCS  180
HGLEILPATS QYGATPHDHD STVQLPQMSA CLQLAHQPSC IQLQQGQGQM GLVAPAQPVH  240
SFQLPQIPND WAMGMDHLTA VPEHLLRSGP TSEVQWQGPS QACNGMPANR PLPGLYQLDP  300
LQADTSAGVC GPHQQLLTCP DDMLGMCLLS IQPHQEQQDQ PIGTVFDTAS STVGLQAAAS  360
TGFPDYSMMS VSTNSQGPSA CASASDALQT PKAPLLLTYP GSLEPSTHMP INMTQLSLAA  420
DAPDAGLSNS QLPAVPTTHG DMPADQAHQP TKRSKGQRRQ KDVKPEVIAL SVDDVKHIVL  480
TEPPEPMYPE VLEVFDMTSF TPAAAARKAA EMSEACGQQL KKAKRALNLK VAVCQYGNHM  540
KESGQSLPAE QEDSLKLIDQ IQEQHPEWLV NPAKAPPEVA QCILNLKRYW ATIQKKQADK  600
EHEDHLAKAH TSSSTACIAV KAPGDAANAE VLADTNAAAD DADADAEVKE PVFAALRDFN  660
CCQSKSLSSR TVAKVRKRLS CGHAANGAAG HLHPAAPAAA TDATATAVIT LRNANHEDSH  720
VAHAPCGRLV GGSSSAVQDG CESLNSHGAA TAQAQLEQQV VQHQSHGEPP AFGTAAPPAE  780
SQLPNCAAGH AAHDDTSGMT NHPPTSCRCP QTAAHLSDVD AVVTVVKKPR RRSMAVTATA  840
ADGNTTAATV AAATTAGGCS GGTAACGTGA VQSRSASPVS TAKPKSSGLS GTSEANEVIP  900
HSRPRRQIRR PVALSDCSSE TLGSSFGDED HNSIQDSDSA VEHQQHLDDA DLDDLDCSSD  960
DDGDKRHPIR AHGKGSKARI ITKNSLREVY HLPISRAAAH LDVGSTVLKK YCRKFNIQRW  1020
PYRKINSLHK LIDAVEGYEK SSGNTRQCAP VLQELRLFLD MTKEDPNIEL DARIKNLRQV  1080
IFKQEYKARQ HA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	8e-18	Nin-like family protein