PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g09070.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

GATA

Protein Properties

Length: 1187aa MW: 128441 Da PI: 6.5984

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g09070.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	47.8	2e-15	344	376	1	33
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C +Cgt +++WR+gp ++ LCnaCGlyyrk Cz02g09070.t1 344 CMHCGTLLSSQWRSGPHNKPVLCNACGLYYRKL 376 99************88888********96 PP
2	GATA	37.4	3.4e-12	394	428	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cgt +p+WR gp ++ LC CG ++rk+++ Cz02g09070.t1 394 CGHCGTEASPQWRAGPPEHPVLCDMCGRHFRKTKT 428 9*******************************976 PP
3	GATA	49.6	5.5e-16	444	478	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ +p+WR gp ++ LCnaCGl+yrk+++ Cz02g09070.t1 444 CHHCGSQFSPQWRGGPADKPVLCNACGLHYRKTRQ 478 **************77777*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1187 aa Download sequence
MLGLQAAGSA QQPEPNPGQA VRLITTQDGV CVTIHQNGSS PASAQSADKL ELAVPSSGLA 60 HCQHNHLGQQ HEQQHQHQQH QQLSILASVA TAVPQAGPDV QGSSESDGTL HREQTPPSDI 120 SDPPPPLSQP LVQACQQQLA AMPPETTAAQ EATGAIGPTA SMDAYGEQGH HMDQLHLDRQ 180 QSTNTSTQQL LPLQQPPHQQ AMLADSATHQ QQPHPAQEQR GDEQREANGH QQHSQQQHLA 240 GGIAQQAPSN GFNNHQQYQE EQQQQQQQQQ FQEQQQQQQH QQCYPNEAQQ LVTQQDSAMR 300 PHAEHHNADG PQQGLPGTSY PDAQAAPTSG DEAGPSGRRM RGPCMHCGTL LSSQWRSGPH 360 NKPVLCNACG LYYRKLQSLP NNTCQVADRL QGPCGHCGTE ASPQWRAGPP EHPVLCDMCG 420 RHFRKTKTLP KRKRRSLTQH FQGCHHCGSQ FSPQWRGGPA DKPVLCNACG LHYRKTRQLP 480 DRPAHVMQTL LDLSRAAEQQ QAMEDNRGAG EAGLVQHVEG GTRQDGSRQD SGESSSCTHT 540 GNTGPSKSVT AGAQGPTHGY PVASALPQQH GSTIAGQNAM QVCTSDAACN MHLVPSDGAD 600 ANGTIQHGGV TASATAQGVD TQMPQAVQPW QAATAGHGSV FSGGQHYYQQ MQQSQQLVAS 660 TDYQMQQQQY AQQYGYYQQY HPMQQHQQQA VVAQPYMPQR PAQQSPAAQQ QQSQSQQPAA 720 PDYDHLHMQG IHHAQTGHYA WQHYYQLQQA AAANAAAAGR VGGPTAQCMP GQQMGWPVVA 780 PGVSMPAMVP GMDAQYQQYQ QQYMQWQQQY AAHQQHMYAQ QQPQHHIHQA PAISAAPTQL 840 DSAGNLDQQA AGQSTSNHQQ AAADYDAQGT VQGLPVHEHQ HPHYQQYMQQ QMHQQMHQQN 900 ECQYSQQPSS THQTLQAADT PSQQQQPQAG NQQVCTDVYS GDLMLEHHHG ALHQQLQHPQ 960 ATTQHADLQP MSPHMSPRAV NAQLYHSLAQ PQPQPQSQQQ QLQQQLQQQQ QQPQQHAVST 1020 GVPLSQQPDA TMAVSGTPLA PFNPNSSATH HPVSVHDGHQ TATAHQTQPT PVAPANGSED 1080 GVPSGATGEQ LGIPVGTPGM MNPMLMPPPM ATFPGSWPSC AVPPVGSHPL AAAMMGQYPA 1140 YGMCMPQPLV IVLCKDNQQQ GASAEGSVVK DVTDRGQEGN GNEARQ*

Sequence ? help Back to Top

Protein Sequence Length: 1187 aa Download sequence

MLGLQAAGSA QQPEPNPGQA VRLITTQDGV CVTIHQNGSS PASAQSADKL ELAVPSSGLA  60
HCQHNHLGQQ HEQQHQHQQH QQLSILASVA TAVPQAGPDV QGSSESDGTL HREQTPPSDI  120
SDPPPPLSQP LVQACQQQLA AMPPETTAAQ EATGAIGPTA SMDAYGEQGH HMDQLHLDRQ  180
QSTNTSTQQL LPLQQPPHQQ AMLADSATHQ QQPHPAQEQR GDEQREANGH QQHSQQQHLA  240
GGIAQQAPSN GFNNHQQYQE EQQQQQQQQQ FQEQQQQQQH QQCYPNEAQQ LVTQQDSAMR  300
PHAEHHNADG PQQGLPGTSY PDAQAAPTSG DEAGPSGRRM RGPCMHCGTL LSSQWRSGPH  360
NKPVLCNACG LYYRKLQSLP NNTCQVADRL QGPCGHCGTE ASPQWRAGPP EHPVLCDMCG  420
RHFRKTKTLP KRKRRSLTQH FQGCHHCGSQ FSPQWRGGPA DKPVLCNACG LHYRKTRQLP  480
DRPAHVMQTL LDLSRAAEQQ QAMEDNRGAG EAGLVQHVEG GTRQDGSRQD SGESSSCTHT  540
GNTGPSKSVT AGAQGPTHGY PVASALPQQH GSTIAGQNAM QVCTSDAACN MHLVPSDGAD  600
ANGTIQHGGV TASATAQGVD TQMPQAVQPW QAATAGHGSV FSGGQHYYQQ MQQSQQLVAS  660
TDYQMQQQQY AQQYGYYQQY HPMQQHQQQA VVAQPYMPQR PAQQSPAAQQ QQSQSQQPAA  720
PDYDHLHMQG IHHAQTGHYA WQHYYQLQQA AAANAAAAGR VGGPTAQCMP GQQMGWPVVA  780
PGVSMPAMVP GMDAQYQQYQ QQYMQWQQQY AAHQQHMYAQ QQPQHHIHQA PAISAAPTQL  840
DSAGNLDQQA AGQSTSNHQQ AAADYDAQGT VQGLPVHEHQ HPHYQQYMQQ QMHQQMHQQN  900
ECQYSQQPSS THQTLQAADT PSQQQQPQAG NQQVCTDVYS GDLMLEHHHG ALHQQLQHPQ  960
ATTQHADLQP MSPHMSPRAV NAQLYHSLAQ PQPQPQSQQQ QLQQQLQQQQ QQPQQHAVST  1020
GVPLSQQPDA TMAVSGTPLA PFNPNSSATH HPVSVHDGHQ TATAHQTQPT PVAPANGSED  1080
GVPSGATGEQ LGIPVGTPGM MNPMLMPPPM ATFPGSWPSC AVPPVGSHPL AAAMMGQYPA  1140
YGMCMPQPLV IVLCKDNQQQ GASAEGSVVK DVTDRGQEGN GNEARQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51080.1	1e-10	GATA family protein