PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc279236.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 183aa    MW: 21149.3 Da    PI: 10.3767
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc279236.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.72.8e-11541084790
                   FAR1  47 k...........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            +           ++ +rr+ra++r+gCka l+++++ ++k++v+++ ++HnH+l+
  Cse_sc279236.1_g010.1  54 TdtpssdiaevvKVIKRRKRASQRCGCKALLRLRQTPENKFVVYTFFEKHNHSLV 108
                            1455666777777889*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
PTPPGSKFWI PEAKNKPVEG TQFDTIEQAL KFYKEEGVKP SPKDDISKKD KSKTDTPSSD  60
IAEVVKVIKR RKRASQRCGC KALLRLRQTP ENKFVVYTFF EKHNHSLVHE NDYKYLRAAR  120
KLTFSKQHLL RKLSNANIGP TRAWKVMIEM YGGFENIGVT DVECRNYRRG LDNFIGNRDA  180
QMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-18FAR1 family protein