PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc278495.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 180aa    MW: 20324.6 Da    PI: 6.7454
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc278495.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.33.4e-07110131223
                            EETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                             C +Cgk F+r  nL+ H+r H
  Cse_sc278495.1_g010.1 110 FCVICGKGFKRDANLRMHMRGH 131
                            6*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
SLLPSVKHPH FSPNTIPNPS VGNGVNVSDN ICNDNINTNS NSNNCNNYSD SNTTHRNMVS  60
KVEDQSHDTD HMDTHEEHED DVDEGEHLPP GSYEILQLEK EEILAPHTHF CVICGKGFKR  120
DANLRMHMRG HGDEYKTAAA LAKPHKEMGS EPKLIKRYSC PYLGCKRNKD HKKFQPLKTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.32e-58C2H2 family protein