PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc192640.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 234aa MW: 26827.5 Da PI: 8.575 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.9 | 7.9e-19 | 66 | 146 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ ++ k r r++ rt+Cka++ v ++ +k++v+++ +eHnH + Cse_sc192640.1_g010.1 66 AYKDYAAEAGFIVRRGHQTND--GGIVMNKEFLCSKEGTKKVKTVK-----RIRSKFRTNCKARIYVVRS-GEKYRVKNFAKEHNHGF 145 6***************98877..999*************9998777.....89999***********999.9**************98 PP FAR1 90 a 90 + Cse_sc192640.1_g010.1 146 F 146 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV 60 EEVYKAYKDY AAEAGFIVRR GHQTNDGGIV MNKEFLCSKE GTKKVKTVKR IRSKFRTNCK 120 ARIYVVRSGE KYRVKNFAKE HNHGFFTAED RHLQKSHRPM SLAHQYFAIK ASNLNIGPCM 180 SFNFIVEILG GFENVGATKI DFKNMSRDIY SYIGKYDAQM IIDKFSILKE RDEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-16 | FAR1 family protein |