PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc175360.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 204aa MW: 23455.9 Da PI: 8.4718 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57.6 | 4.3e-18 | 66 | 146 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YA e+GF v++ ++++ g +++++f Cskeg+++ ++ k r r+e rt+Cka++ v ++ +k++v+++ +eHnH + Cse_sc175360.1_g010.1 66 AYKDYAAEAGFIVSRGHQTND--GGIVMNKEFLCSKEGTKKVKSVK-----RIRSEFRTNCKARIYVVRS-GEKYRVKNFAEEHNHCF 145 6***************98877..999*************9998777.....9999************999.9**************87 PP FAR1 90 a 90 + Cse_sc175360.1_g010.1 146 F 146 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MRQNCASNEF VEDENLSADV NVEENEEANS PDFFTSTSML IKLVVVKTLV PVEGTLFDSV 60 EEVYKAYKDY AAEAGFIVSR GHQTNDGGIV MNKEFLCSKE GTKKVKSVKR IRSEFRTNCK 120 ARIYVVRSGE KYRVKNFAEE HNHCFFTAKD RHLQKSHRSM SLAHQYFAIK ASNLNIGPCM 180 SFNLSQSFWE DMKMLVLLRL ILRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-11 | FAR1 family protein |