PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc123229.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 278aa MW: 32012 Da PI: 6.7178

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc123229.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.9	1.6e-18	66	146	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ ++ k r r+e rt+Cka++ v ++ +k++v+++ +eHnH + Cse_sc123229.1_g010.1 66 AYKDYAVEAGFIVRRGHQTND--GGIVMNKEFLCSKEGTKKVKSVK-----RIRSEFRTNCKARIYVVRS-GEKYRVKHFAEEHNHGF 145 5*************98877..999*********9998777.....9999********999.9************98 PP FAR1 90 a 90 + Cse_sc123229.1_g010.1 146 F 146 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKHVVVKTLV PVEGTLFDSV 60 EEAYKAYKDY AVEAGFIVRR GHQTNDGGIV MNKEFLCSKE GTKKVKSVKR IRSEFRTNCK 120 ARIYVVRSGE KYRVKHFAEE HNHGFFTAED RHLQKSHRSM SLAHQYFDIK ASNLNIGPCM 180 SFNFIAELLG GYENVGATKT DFKNMSRDIY SYIGKYDAQM IIDKFSILKE RDENFTFKFK 240 TNTDGQLSCL FWSDDTSKRN YEAFGDVLSF DATYKTNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-25	FAR1 family protein