PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc101366.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 317aa MW: 36670 Da PI: 8.6168

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc101366.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47	8.3e-15	80	185	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 ++Y eYA ++ Fs+rks+sk++ + e+t+r vC++ gk++++ k + +++ +++ + t+C+a+++ + Cse_sc101366.1_g010.1 80 DMYLEYALKARFSIRKSTSKRK--KCEVTHRYIVCNRAGKPRKTIVKdtlaqssqtvdnqkngsnKPRQKCNSNYSATDCNACVRFRA 165 58*************99988..7789**********9988889*****999997666666799999******** PP FAR1 71 ek.dgkwevtkleleHnHel 89 + ++ +++++++++HnH l Cse_sc101366.1_g010.1 166 IHgTSAFKLYEFVENHNHLL 185 9***************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
VTAVSSMQNE ANVHTQSARN DEQFIVNEDF SSDYSDLDDS ESDDECIPTP KGHKYWVPEV 60 PADEKPSEGN VFDTFDEAYD MYLEYALKAR FSIRKSTSKR KKCEVTHRYI VCNRAGKPRK 120 TIVKDTLAQS SQTVDNQKNG SNKPRQKCNS NYSATDCNAC VRFRAIHGTS AFKLYEFVEN 180 HNHLLLDENN ADLLKARRKL DFSDKLFIHR ASLSNLGPTK AHRLRVAFMG SYQKVRGKPS 240 DWKNFRRSVN KYIGPRDAQM LIDKMNDRKK HVPNFSFEYH TVDDVLSRMF WADETMKCNY 300 NEFGDVVSFD ATYRTNK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	124	KRKKCEVTHRYIVCNRAGKPRKTIVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-11	FAR1 family protein