PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc086642.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 286aa    MW: 33059.5 Da    PI: 10.2586
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc086642.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1691.2e-2170200190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......................................... 47 
                            kfY++YA+e GF+vr+  +kk+k+n+  t + fvC +eg+ ++++kk                                         
  Cse_sc086642.1_g010.1  70 KFYKDYAREGGFEVRRGGQKKTKKNDDPTLKYFVCAREGRWSKKTKKnddptlkyfvcaregvkpsatnlnkktnslktnesqshvvn 157
                            6***************************************999988899*************************************99 PP

                   FAR1  48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            ++ +rr+r+++r+gC+akl+++++ ++kw+v+k+ ++HnH l+
  Cse_sc086642.1_g010.1 158 EVIKRRKRPSQRCGCQAKLRIRRTPENKWVVYKFLEKHNHRLV 200
                            89999************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MNTTTSDLQG KPSTPISNHN VQHPDIHDDQ SVPQVGSYQP TPEGSKFWVS DAKNKPVEGT  60
EFDTLELALK FYKDYAREGG FEVRRGGQKK TKKNDDPTLK YFVCAREGRW SKKTKKNDDP  120
TLKYFVCARE GVKPSATNLN KKTNSLKTNE SQSHVVNEVI KRRKRPSQRC GCQAKLRIRR  180
TPENKWVVYK FLEKHNHRLV REEDYMYLKV SRKISFPQQQ LLYHLSNANL GPTRAWKVFK  240
EMCGGFENIG VTDVECRNYK RGLTNFIGTR DAQMVQYGIG SFYGHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-23FAR1 family protein