PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc084908.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 550aa MW: 61995 Da PI: 7.1683

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc084908.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	53.4	5.1e-17	273	317	2	46
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 e++isle+++k+F +pi +AA +L+v+ ++LKriC GI+RWP+ Cse_sc084908.1_g010.1 273 ESSISLEEIKKHFGKPIGEAAANLNVSRSTLKRICNDRGIPRWPY 317 789*****************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MDLYLYLHQF ISLMILCLDV QKQVSNERRC HEIAKICIAL KTVCDTHKLP LAQTWSLSGS 60 NSFVANSGQL EQTCSSFKKS CIGKTCMSTA NLPFYVRDMS MWGFHEACIE RHLEKSRGVV 120 GRSLLTCGSW FCKDVTELDE DDYPLVPFAR MSRLTSCLAI YIKSIELASE YVIEFFLPTL 180 STNELDQQIL VKTVKQQIKN VFKLCVTSTN QEIGAVNIES QPSPLTILAV SEVPRMSVNI 240 ENEPSNSGVV GACQPVVPYL EKRVTYRKRK SSESSISLEE IKKHFGKPIG EAAANLNVSR 300 STLKRICNDR GIPRWPYKMK RTDISVGLEE ISEPCEETMK VIEDDRLLEV PRMSETSEWM 360 SETSDSESCN SGAVGTSHGV VPYWKKRTTQ RRRKRSERVI TLEQIQNHTG KPVDDATAIL 420 NDSISMPPYW HNSTQQHEQT NMPDVRAQPK MSIENTAANT VKYLTVKATY EGNTVKFPFI 480 LSDGLAKLEK LIATRFRLSL GSFKLKYEDK EGDMILVACD TDLEASVGDS RQPVDPTVIR 540 LLVIDRPSES

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MDLYLYLHQF ISLMILCLDV QKQVSNERRC HEIAKICIAL KTVCDTHKLP LAQTWSLSGS  60
NSFVANSGQL EQTCSSFKKS CIGKTCMSTA NLPFYVRDMS MWGFHEACIE RHLEKSRGVV  120
GRSLLTCGSW FCKDVTELDE DDYPLVPFAR MSRLTSCLAI YIKSIELASE YVIEFFLPTL  180
STNELDQQIL VKTVKQQIKN VFKLCVTSTN QEIGAVNIES QPSPLTILAV SEVPRMSVNI  240
ENEPSNSGVV GACQPVVPYL EKRVTYRKRK SSESSISLEE IKKHFGKPIG EAAANLNVSR  300
STLKRICNDR GIPRWPYKMK RTDISVGLEE ISEPCEETMK VIEDDRLLEV PRMSETSEWM  360
SETSDSESCN SGAVGTSHGV VPYWKKRTTQ RRRKRSERVI TLEQIQNHTG KPVDDATAIL  420
NDSISMPPYW HNSTQQHEQT NMPDVRAQPK MSIENTAANT VKYLTVKATY EGNTVKFPFI  480
LSDGLAKLEK LIATRFRLSL GSFKLKYEDK EGDMILVACD TDLEASVGDS RQPVDPTVIR  540
LLVIDRPSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-51	Nin-like family protein