PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc081936.1_g010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 363aa    MW: 42031 Da    PI: 10.003
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc081936.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.31.9e-1119734790
                   FAR1 47 k...........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                           +           ++ +rr+ra++r+gCka l++++++++k++v+++ ++HnH+l+
  Cse_sc081936.1_g010.1 19 TdtppsdiaevvKVIKRRKRASQRCGCKALLRLRQTSKNKYVVYTFFEKHNHSLV 73
                           14566667777777899************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
EGVKPAPKTN NPKKDKSKTD TPPSDIAEVV KVIKRRKRAS QRCGCKALLR LRQTSKNKYV  60
VYTFFEKHNH SLVHENDYKY LRAARKLTFS KQQFLRQLSN ANIGPTRAWK VMKEMYGGFE  120
NIGNLLSRQE FFSNFLVEYK QDKKDKTLVG LFWVDSQAKL NYAAFGDVVS FDATFRSNSK  180
GWVVIHLFIY NTTLGFMYLQ KRNIHEVVRI YPTSTNSDCV VDATVREIYT NIEESINHLI  240
GDIQKLHIYR DDQLALMQKS RVDVPNPPRQ NTNKAYARTL GVTEPAELTI LTPTDINNKG  300
NVVRTRRKSK FELATELGDK PKRMCKSCGK LARHDFRNCP KKKKDLQDED VDEDEDQFMD  360
DSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-18FAR1 family protein