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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc081936.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 363aa MW: 42031 Da PI: 10.003 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.3 | 1.9e-11 | 19 | 73 | 47 | 90 |
FAR1 47 k...........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++ +rr+ra++r+gCka l++++++++k++v+++ ++HnH+l+ Cse_sc081936.1_g010.1 19 TdtppsdiaevvKVIKRRKRASQRCGCKALLRLRQTSKNKYVVYTFFEKHNHSLV 73 14566667777777899************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
EGVKPAPKTN NPKKDKSKTD TPPSDIAEVV KVIKRRKRAS QRCGCKALLR LRQTSKNKYV 60 VYTFFEKHNH SLVHENDYKY LRAARKLTFS KQQFLRQLSN ANIGPTRAWK VMKEMYGGFE 120 NIGNLLSRQE FFSNFLVEYK QDKKDKTLVG LFWVDSQAKL NYAAFGDVVS FDATFRSNSK 180 GWVVIHLFIY NTTLGFMYLQ KRNIHEVVRI YPTSTNSDCV VDATVREIYT NIEESINHLI 240 GDIQKLHIYR DDQLALMQKS RVDVPNPPRQ NTNKAYARTL GVTEPAELTI LTPTDINNKG 300 NVVRTRRKSK FELATELGDK PKRMCKSCGK LARHDFRNCP KKKKDLQDED VDEDEDQFMD 360 DSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-18 | FAR1 family protein |