PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc081784.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 191aa    MW: 21791.4 Da    PI: 7.2947
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc081784.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.4e-105295146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                           rg+++  E  l  d+++ +G++ W++Ia++++ g t+  +k++w++
  Cse_sc081784.1_g010.1 52 RGSFSLKEATLVMDLHNTFGNK-WARIASYLP-GSTDSAVKNFWNS 95
                           899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MHEGGNRLST RQKLKKVLWS PEEDEKLVNY ITTYGRHEQG YKDEAKVAGL KRGSFSLKEA  60
TLVMDLHNTF GNKWARIASY LPGSTDSAVK NFWNSNTKKK LLQFQLQTVN EQGRRVDAPL  120
PLVKHDQETE NEVDLHPLPP SFMKEYFDPI LDQNCHPNHL ITQTGSESDS MNLITNSQPN  180
IQSIGHNFNS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.29e-30MYB family protein