PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc077824.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 645aa MW: 73882.5 Da PI: 9.2926

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc077824.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.1	4.9e-07	49	111	26	88
FAR1 26 geitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 ++ t++C +g ++++++ +k+++++ + t+C +++ kk +dg+w+ + +l HnH+ Cse_sc077824.1_g010.1 49 KKDQYVTLRCDLSGVYQDKRRAGTKRKKSTGSRLTDCPFQITGKKGSDGVWVFKVKNLAHNHD 111 2224689**********999899999999999**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MTSIDQSTIN QSEEIYLATS KFESSDDLLK SARAFYYTKG YGLSIRDSKK DQYVTLRCDL 60 SGVYQDKRRA GTKRKKSTGS RLTDCPFQIT GKKGSDGVWV FKVKNLAHNH DPSTDMSGHP 120 SFRQLEPDDV QTVKKMSLSG IPPRQILSTL RQQNPNLPAI SRTIYNLKAK FRKDDLGNRS 180 AVSLLFEELE KGGFSHDILH NPDGYITGLF IAHPLSIKLA KLFSNTFVMD CTYKTNRYNM 240 PLLDIIGVTC FNTSFYSGFV FLEKEDKDHY VWALSVFKKI LGDSNQPSVI MSDRELALMN 300 AITDVFPTTT SLLCVWHIEK NVFSNCKGYF ERAEEFNMFM LSWNNLVYST TEYLFESNWK 360 EFELFYSGKK DAIEYIKDTW LPWKDKFVSA WTEKHLHFGN RSSSRAEGAH AKLKLYLQVS 420 TGSFQDVKKK ICLAVEHEFN EIKVKLASEK IRVPHNCNMP LFRELLSHVS QFALKEIHMQ 480 YEKIKDGTVT PCTGHFMATM GLPCTHKIVS SLGMTIPLNI IHPHWRIDTL SLNPEVDSSS 540 DGNNNFFVLL NELRSKYQMW PLGKQELATS MIAKLVNESD TYFEPVIRRP KGRPPKAKKK 600 KGKTSTTRDR SKFELVESSH ARNPSSFSHV QHHNNLIDLN AYPEC

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MTSIDQSTIN QSEEIYLATS KFESSDDLLK SARAFYYTKG YGLSIRDSKK DQYVTLRCDL  60
SGVYQDKRRA GTKRKKSTGS RLTDCPFQIT GKKGSDGVWV FKVKNLAHNH DPSTDMSGHP  120
SFRQLEPDDV QTVKKMSLSG IPPRQILSTL RQQNPNLPAI SRTIYNLKAK FRKDDLGNRS  180
AVSLLFEELE KGGFSHDILH NPDGYITGLF IAHPLSIKLA KLFSNTFVMD CTYKTNRYNM  240
PLLDIIGVTC FNTSFYSGFV FLEKEDKDHY VWALSVFKKI LGDSNQPSVI MSDRELALMN  300
AITDVFPTTT SLLCVWHIEK NVFSNCKGYF ERAEEFNMFM LSWNNLVYST TEYLFESNWK  360
EFELFYSGKK DAIEYIKDTW LPWKDKFVSA WTEKHLHFGN RSSSRAEGAH AKLKLYLQVS  420
TGSFQDVKKK ICLAVEHEFN EIKVKLASEK IRVPHNCNMP LFRELLSHVS QFALKEIHMQ  480
YEKIKDGTVT PCTGHFMATM GLPCTHKIVS SLGMTIPLNI IHPHWRIDTL SLNPEVDSSS  540
DGNNNFFVLL NELRSKYQMW PLGKQELATS MIAKLVNESD TYFEPVIRRP KGRPPKAKKK  600
KGKTSTTRDR SKFELVESSH ARNPSSFSHV QHHNNLIDLN AYPEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-17	FAR1 family protein