PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc076806.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 254aa MW: 29409.4 Da PI: 9.7709 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 59.7 | 9.5e-19 | 1 | 94 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 +Y++YA++ GFsvr s++++ ++g + ++ +vC+keg ++ +k+ +e++ rt++ +rt C a+++ k++ + k+e++++e++ Cse_sc076806.1_g010.1 1 MYENYAEKEGFSVRLSTQNTL-KSGIVERKYLVCNKEGLPKGVNKDtmseetSETQIRTSSISRTRCMARVRFKLNAnHTKYELYDFEEN 89 6***************99998.7888*************999988888888778888899****************999*********** PP FAR1 85 HnHel 89 HnH++ Cse_sc076806.1_g010.1 90 HNHTF 94 ***87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MYENYAEKEG FSVRLSTQNT LKSGIVERKY LVCNKEGLPK GVNKDTMSEE TSETQIRTSS 60 ISRTRCMARV RFKLNANHTK YELYDFEENH NHTFILVVYR NLSNKRKKMS HKQQIYMQQL 120 GGTNIGATRA HHLYAATNGG YDSVDATETE FRNNKRDLNS HIGDSDAQMF ITKMENRKKN 180 VANFSFEYAV EDSQLTTLFW GDEMAKCFLK AFSKQPTLVV TDQDPAMRKA VAAVFKESKH 240 RLCMWHITNK LPFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-11 | FAR1 family protein |