PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc076331.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 502aa    MW: 56818 Da    PI: 9.445
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc076331.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.73.2e-1121014621364
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            l++lL  cA+ vs++d++ ++ lL+r++e+asp+gd mqR+a+yf  +L+ar+a+s++e+ykal  ++ts    +++l+a++lf  ++
  Cse_sc076331.1_g010.1 101 LRTLLSLCAQSVSTNDQRGVTDLLKRIREHASPTGDGMQRMAHYFSAGLEARMAGSGTEIYKALLRKPTS---AVDVLKAYHLFLGCF 185
                            5789999*********************************************************999999...9************** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgv 174
                            P++k+sh++aN++I++ +++++++HiiDf+i +G+QWp+L++ L++Rp+gpp+lRiTgv+ p +g   ++++eetg+rLa++Ae++gv
  Cse_sc076331.1_g010.1 186 PFIKVSHFVANKTIMQIAQHKKKLHIIDFGIYYGFQWPSLIERLSTRPGGPPELRITGVDFPCPGfrPSQRVEETGRRLANYAETFGV 273
                            **************************************************************99999********************* PP

                   GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                            +f+f++ +a+++e+++le+L+++++E+l+Vn++++  +llde+v ++s+r++vL+l+++++P++++    + +++++ F++rf eal 
  Cse_sc076331.1_g010.1 274 KFKFKA-IAQKWESIRLEDLELDSEETLVVNCAYRFRNLLDETVIVDSPRNKVLELIRKMNPQIFIQGIVNGSYSAPFFVTRFREALF 360
                            ******.7******************************************************************************** PP

                   GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                            +ys++fd+lea++ re+eeri vE+el gre++nv+aceg er+er et+++W+ r ++aGF ++p++ ++ k ak   +  + + ++
  Cse_sc076331.1_g010.1 361 FYSSVFDMLEATVNRETEERILVEKELWGREAMNVIACEGGERIERPETYKQWQVRNRRAGFCQIPFDPEILKMAKIRANSGYHKDFM 448
                            ********************************************************************************999888** PP

                   GRAS 351 veeesgslvlgWkd 364
                            ++e+ ++l++gWk+
  Cse_sc076331.1_g010.1 449 IDEDGHWLLQGWKG 462
                            ************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
FHDNGSRVFP NGDGVLDIGS RGKKNLHSID LADDGRSLKQ SAVYTEPTVR SKIFDELLLC  60
GGAKQHPSQC EYLKKEVIEV QPKGSKGRGK KQGGNKEVVD LRTLLSLCAQ SVSTNDQRGV  120
TDLLKRIREH ASPTGDGMQR MAHYFSAGLE ARMAGSGTEI YKALLRKPTS AVDVLKAYHL  180
FLGCFPFIKV SHFVANKTIM QIAQHKKKLH IIDFGIYYGF QWPSLIERLS TRPGGPPELR  240
ITGVDFPCPG FRPSQRVEET GRRLANYAET FGVKFKFKAI AQKWESIRLE DLELDSEETL  300
VVNCAYRFRN LLDETVIVDS PRNKVLELIR KMNPQIFIQG IVNGSYSAPF FVTRFREALF  360
FYSSVFDMLE ATVNRETEER ILVEKELWGR EAMNVIACEG GERIERPETY KQWQVRNRRA  420
GFCQIPFDPE ILKMAKIRAN SGYHKDFMID EDGHWLLQGW KGPRENEDHR GAVNLSGTKN  480
STSKGSVVRK SGIVESVGTF DK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-160GRAS family protein