PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc073873.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 515aa MW: 60301.1 Da PI: 6.3853

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc073873.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.4	8.1e-07	86	131	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 ++Y eY+++ F++rks+ k++ +++eit+r C++ gkr+++ + Cse_sc073873.1_g010.1 86 DMYLEYSQKGRFNIRKSNVKRN-NKREITHRSILCNRAGKRRSKVEV 131 58*************99998.7777************998654 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MVEITEQGSI QLGEGSSSRD LQVENTTITD QANLEEHSDQ YDIDIYEADP EFVPTPKGTP 60 YWAPDIPEDE KPKRGVMFDT FDLAYDMYLE YSQKGRFNIR KSNVKRNNKR EITHRSILCN 120 RAGKRRSKVE VNTLKEGEEE DEAYKVIDFV ENHNHPLMNE NNMDLSRARR QLQFGDYVFI 180 NRASLSNVGP TKAHRLKVAL MVGYDKVRGT PMDWRNFRRA VNSFVGDRDA HMLVDKMINR 240 KNHVPEFSFE YHIDTEGELV SFFWADETMK CNYVAFGDVV SFDATFRTNK YHFVFVPFTG 300 IDHHQKCVTF GAALLCDETY ESYCWMLEAF LKVHIKQPPL ALTDQDAALR KAVVKIFPQS 360 HHRLCMWHIT QKLPGKVLGD LEVDSEFRKD FHKLIWNVYI TPQIFEQRWN DLINRYNLHE 420 NKWLSDMYEI RDRWIPGYFS EVPMCGLMKT TSRSESSNAF FQIFSHKGNT FVQFMLCFES 480 AMEKQRYTQR VLDNKENGSN PSLLTDLAIE AHARE

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MVEITEQGSI QLGEGSSSRD LQVENTTITD QANLEEHSDQ YDIDIYEADP EFVPTPKGTP  60
YWAPDIPEDE KPKRGVMFDT FDLAYDMYLE YSQKGRFNIR KSNVKRNNKR EITHRSILCN  120
RAGKRRSKVE VNTLKEGEEE DEAYKVIDFV ENHNHPLMNE NNMDLSRARR QLQFGDYVFI  180
NRASLSNVGP TKAHRLKVAL MVGYDKVRGT PMDWRNFRRA VNSFVGDRDA HMLVDKMINR  240
KNHVPEFSFE YHIDTEGELV SFFWADETMK CNYVAFGDVV SFDATFRTNK YHFVFVPFTG  300
IDHHQKCVTF GAALLCDETY ESYCWMLEAF LKVHIKQPPL ALTDQDAALR KAVVKIFPQS  360
HHRLCMWHIT QKLPGKVLGD LEVDSEFRKD FHKLIWNVYI TPQIFEQRWN DLINRYNLHE  420
NKWLSDMYEI RDRWIPGYFS EVPMCGLMKT TSRSESSNAF FQIFSHKGNT FVQFMLCFES  480
AMEKQRYTQR VLDNKENGSN PSLLTDLAIE AHARE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	110	VKRNNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-59	FAR1 family protein