PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc073544.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 27918.4 Da PI: 6.3058 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.4 | 6e-49 | 7 | 135 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lp+G+rF+Ptdeel+++yL+ k++g++ e+ ++i+e+d++k ePwdLp + +++ ++ew+fF+++d+ky++g+r nrat +gyWkat Cse_sc073544.1_g010.1 7 LPVGYRFRPTDEELINHYLRLKINGRHDEV-TCIREIDVCKNEPWDLPdlSVIESIDNEWFFFCPKDRKYQNGERLNRATVAGYWKAT 93 799************************998.89**************96447788899****************************** PP NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 gkd++++++ ++ ++g kktLvfy grapkge+t+Wv+hey Cse_sc073544.1_g010.1 94 GKDRTIKTSrGSCVIGKKKTLVFYIGRAPKGERTHWVIHEYC 135 ******998566779**************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MDVLPVLPVG YRFRPTDEEL INHYLRLKIN GRHDEVTCIR EIDVCKNEPW DLPDLSVIES 60 IDNEWFFFCP KDRKYQNGER LNRATVAGYW KATGKDRTIK TSRGSCVIGK KKTLVFYIGR 120 APKGERTHWV IHEYCPTEKE LDGSHPGQSP FVLCRLFKKH DCKDENIGIS NFNDVDQSSA 180 HSPSVVKSST EDPQPSVNDS CAVASSDKTN VDPLDYLDFP QFDYNYNMKD LPDHLGSKLF 240 SPTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 9e-80 | NAC family protein |