PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc072465.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 173aa    MW: 19027.9 Da    PI: 4.665
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc072465.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-161363155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           s y+GVr +k  g+Wv+eIr+p     + r++lg+f+t+e+Aa a++a   +++g
  Cse_sc072465.1_g020.1 13 SVYRGVRKRK-YGKWVSEIREPMG---KSRIWLGSFDTPEMAAVAYDATSFYFRG 63
                           78*****999.8*********843...5*******************98887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MSDTRSSSGG TSSVYRGVRK RKYGKWVSEI REPMGKSRIW LGSFDTPEMA AVAYDATSFY  60
FRGDTSRLNF PYLANALPRP ASSSAEDIRL AAHEATLLVK PSISEMDSGS GSGSAHTVPT  120
NIGLSASQIQ AINDAPLDST ETWMELNNHD TQMYLFDHTN DWDEVPDDSI WGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.17e-46ERF family protein