PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc070922.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 636aa    MW: 69992.9 Da    PI: 6.6104
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc070922.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS93.72.9e-292403992162
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                             +lL+e+A a+++g++  a+++L+r s+ ++ +g+p qRl + +t AL++r++          +p++ts+   ++++ +++l+++ sP
  Cse_sc070922.1_g010.1 240 NQLLTEAAGAITDGKQDTASEILTRASKYSNARGTPEQRLCFNITTALKTRMSV--------NEPKTTSDLYGKDHILSTQLLYDKSP 319
                            689*************************************************98........5777777777**************** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRp....eg.....ppslRiTgvgspesgskeeleetg 162
                            ++k+++++aN+aIlea    +++H++Dfdi++G+Q++ Ll+++a +R+    +g     p +l++T++++  +g  e+l+ +g
  Cse_sc070922.1_g010.1 320 CFKLGFIAANNAILEAG---KKIHVLDFDIGNGVQYMYLLNEIAaAREtreaRGddiqtPFTLKLTTMADFGNGGVERLKLVG 399
                            **************996...68*********************9666655451155653669999999998887888888777 PP
2GRAS213.21.4e-65406635139373
                   GRAS 139 ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserde 226
                            p +l++T++++  +g  e+l+ +ge L+++A++lgv+f++nvl   +l ++++ +L+v+++E+l+Vn++++l+rl+desv++e+ rde
  Cse_sc070922.1_g010.1 406 PFTLKLTTMADFGNGGVERLKLVGEGLKELANKLGVTFSYNVL-NLKLCEINTTSLAVENDEVLVVNFAFKLFRLPDESVTTENLRDE 492
                            558********9999***************************5.889***************************************** PP

                   GRAS 227 vLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlek 314
                            vL+ vk+lsP +v+vveqe++ n++sF +r+++a+ yy al++sl+a+++r++++r+k+++  l+r+i+n vaceg++r+er+e ++k
  Cse_sc070922.1_g010.1 493 VLRRVKGLSPALVTVVEQELNGNTASFETRVSQACGYYLALLESLDATIGRDHSDRVKIDEG-LSRKIMNSVACEGRDRVERCEVFGK 579
                            **************************************************************.************************* PP

                   GRAS 315 WrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                            Wr r+++aGFkp ++s+   ++a+++ r  +  g++v+ee g + lgW++r+L+++S W
  Cse_sc070922.1_g010.1 580 WRVRMSMAGFKPKAMSQL-GDKANSVTRGNP--GFTVKEEGGGISLGWMGRTLTVASTW 635
                            ************999875.567888888888..************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    
MSSGYPNGHA HQDYYTNINM NMNINNNVNG RSMSTYRSPL AGILNDRRQD LIGKRSLAEF  60
QHQQHQQQQL LLQQQASFYL RNVKPRSYSS NNNLADFSTS SALLNVPRYG VPVMQNYNNN  120
LGMMGTNIYQ NTLRAGGYSL PAPVPASVKQ AQALVTNNEN NNNNNMMKHL QELEKQLLLD  180
DEDVENDVSG VTNSEWSEMM SPPVILTKAE NNILSPSPTS SSSSSCASTS ASPAGPVNIN  240
QLLTEAAGAI TDGKQDTASE ILTRASKYSN ARGTPEQRLC FNITTALKTR MSVNEPKTTS  300
DLYGKDHILS TQLLYDKSPC FKLGFIAANN AILEAGKKIH VLDFDIGNGV QYMYLLNEIA  360
AARETREARG DDIQTPFTLK LTTMADFGNG GVERLKLVGE DDIQTPFTLK LTTMADFGNG  420
GVERLKLVGE GLKELANKLG VTFSYNVLNL KLCEINTTSL AVENDEVLVV NFAFKLFRLP  480
DESVTTENLR DEVLRRVKGL SPALVTVVEQ ELNGNTASFE TRVSQACGYY LALLESLDAT  540
IGRDHSDRVK IDEGLSRKIM NSVACEGRDR VERCEVFGKW RVRMSMAGFK PKAMSQLGDK  600
ANSVTRGNPG FTVKEEGGGI SLGWMGRTLT VASTWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-112GRAS family protein