PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc070613.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 543aa MW: 62076.7 Da PI: 8.2536

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc070613.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.6e-07	83	153	2	48
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk........................t 48 fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e++ k + Cse_sc070613.1_g010.1 83 FYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSYGKpgdsvtdndisgqseisddshrfgD 153 9****************************************998887888887777777777777766652 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MIVSFFNLNN DVETVRIRDH VGFYVCGKDG SRTWYPDCLE KPIEGCQFIS IDQAYNFYVA 60 YDKGFEKPIE GFQFISIDQA YIFYVAYGKK GGFDCRRGGQ YKAKGFSDAT LKYFYCSRQG 120 LNEDSYGKPG DSVTDNDISG QSEISDDSHR FGDVKKKQTR KRTSFRVGTT VIDCKNQKKK 180 ISVFIGDRDA QMVVEKLLSR KLHSPGDDDK LVGLFWADEE AIKDYASFGD IVSFDATFRS 240 NKYEMVFVPF TGINHHNSCL TFASGLLADE SVGAYIWLLE QFKEAFGKEL EVVITDQDPP 300 MKISASQIRG IVCVGTALCN WTDFKQRICD IVWTDQILPE KFETEWDRMI NDFEQSDNKW 360 LGDMFNMRER WIPAMNNVKE FPRNYLKKRW LKNTKPSRSA LPRIIGASDL VRNEVLDMYE 420 SFESTVDRLV HDLSKMHIYK DKLQELFNQA VIDIPTVPKC DGKAVMSSML GVKEPEKKTM 480 NNPGKSKTKG TGCFSRFKPI ADVSAEELSK RRTCGVCGQK EGHNSRTCTR KMVETTPSKK 540 KKT

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MIVSFFNLNN DVETVRIRDH VGFYVCGKDG SRTWYPDCLE KPIEGCQFIS IDQAYNFYVA  60
YDKGFEKPIE GFQFISIDQA YIFYVAYGKK GGFDCRRGGQ YKAKGFSDAT LKYFYCSRQG  120
LNEDSYGKPG DSVTDNDISG QSEISDDSHR FGDVKKKQTR KRTSFRVGTT VIDCKNQKKK  180
ISVFIGDRDA QMVVEKLLSR KLHSPGDDDK LVGLFWADEE AIKDYASFGD IVSFDATFRS  240
NKYEMVFVPF TGINHHNSCL TFASGLLADE SVGAYIWLLE QFKEAFGKEL EVVITDQDPP  300
MKISASQIRG IVCVGTALCN WTDFKQRICD IVWTDQILPE KFETEWDRMI NDFEQSDNKW  360
LGDMFNMRER WIPAMNNVKE FPRNYLKKRW LKNTKPSRSA LPRIIGASDL VRNEVLDMYE  420
SFESTVDRLV HDLSKMHIYK DKLQELFNQA VIDIPTVPKC DGKAVMSSML GVKEPEKKTM  480
NNPGKSKTKG TGCFSRFKPI ADVSAEELSK RRTCGVCGQK EGHNSRTCTR KMVETTPSKK  540
KKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-27	FAR1 family protein