PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc070554.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 267aa    MW: 31016.8 Da    PI: 9.9
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc070554.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1349.9e-1141954790
                   FAR1 47 k...........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                           +           ++ +rr+ra++r+gCka l+++++ ++k++v+ + ++HnH+l+
  Cse_sc070554.1_g010.1 41 TdtpssdiaevvKVIKRRKRASQRCGCKALLRLRQTPENKYVVYIFFEKHNHSLV 95
                           14555667777778899************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MNKPVKGTQF DTIEQALKFY KEEGVKPSPK DDISKKDKSK TDTPSSDIAE VVKVIKRRKR  60
ASQRCGCKAL LRLRQTPENK YVVYIFFEKH NHSLVHENDY KYLRAARKLT FSKQHPNVVD  120
AKLYFVLGRP LKISPTKAWK VMIEMYGGFE NIGVTDVECR NYRRGLDNFI GNRDAQMVVE  180
KLLSRQQFFS EFSVEYKQDK KDKTLIGLFW SDSQAKLNYS TFGDVVSFDA TFRSNRVMLS  240
AYSYCVLVEL CCEHRSVVYH ICLRTPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-23FAR1 family protein