PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc070170.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 149aa    MW: 17461.3 Da    PI: 9.0531
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc070170.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000432142122
                           EEETTTTEEESSHHHHHHHHHH CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
                           y+C+ C k+F++   L  H+  
  Cse_sc070170.1_g010.1 21 YECKTCEKRFKSFQALGGHQGI 42
                           99*********99999888765 PP
2zf-C2H217.89.3e-067193123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           ++C+ C+k+F +  +L  H+r+H
  Cse_sc070170.1_g010.1 71 HQCKMCTKVFETGQMLGGHMRKH 93
                           79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MVIFKQLEEN SGFQETDGFG YECKTCEKRF KSFQALGGHQ GIHKKIKPSE DNNVDVMCML  60
SLNLIPTGSL HQCKMCTKVF ETGQMLGGHM RKHRDEKALN LIKKQELWRQ KSDSVLTMEE  120
VERRKAEVDE RMRVRRELIL AAKELRLWF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46080.13e-20C2H2 family protein