PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc069093.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Trihelix
Protein Properties Length: 340aa    MW: 38804.2 Da    PI: 10.1831
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc069093.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix53.94.8e-1716107187
               trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfd 83 
                            +Wt++e l+Liea+re++ +l+r+ l+ p+W+ v++k+     e    +++ qC++k+e+l++r+k +k+++   + ++  s++ yf+
  Cse_sc069093.1_g010.1  16 CWTRDEALVLIEAYRERWYALNRQFLRNPDWDMVAEKVttacPEVTPPKTAAQCRHKMEKLRQRHKVEKQRAAMFSgERFFSSWYYFE 103
                            8************************************998888999999**********************998854778899***** PP

               trihelix  84 qlea 87 
                             +ea
  Cse_sc069093.1_g010.1 104 AMEA 107
                            *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MSSSGHKTAR KFPPPCWTRD EALVLIEAYR ERWYALNRQF LRNPDWDMVA EKVTTACPEV  60
TPPKTAAQCR HKMEKLRQRH KVEKQRAAMF SGERFFSSWY YFEAMEAMDP GPEPGSGLKA  120
ALAKTPDSGS GRGKLQALGT SSVKRPNPSL DSRVRVSGRN PLYLDSLGSD EEPEFETPFR  180
SKPTITPSSR EREPARSGLR PRKFIKVNED DEEEDEEMWV KVPYKSNVFV RRNNKNVANV  240
NNLRSNVNHS MPSVRNVDKG KEKRKGGGMA DIVTSIRLLG DGFMKMEKMK IDMAKEIEKM  300
RMDTEMKRNQ LILDSQRQII EAFVNGVVEA RKRGSGVDDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-37Trihelix family protein