PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc068574.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 937aa    MW: 107121 Da    PI: 4.6303
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc068574.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.24.6e-1182173798
                            .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                     B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                            + + + +++l lp +f++   ++++e   +++++++g++ ++ ++   r ks +y l+ GW  F + n++ +gD +vFk++ ++++ +
  Cse_sc068574.1_g010.1  82 TISITHKHMLLLPPDFVALARIDTKE--NIIMKSLDGNESQMAVRPdkRFKSAQYNLSLGWVAFKQRNNISQGDECVFKYITSEDKMC 167
                            566778899*******9766766555..69999****99999996633445555***************************9999999 PP

                            EEEEE- CS
                     B3  93 vvkvfr 98 
                            +vk+ +
  Cse_sc068574.1_g010.1 168 LVKITK 173
                            999876 PP
2B331.92.4e-102082911396
                            TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                     B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                            +++l lp +f++   +   ++k +++++++g++ ++ l+    + s ry ++ GW  F ++n++ +gD +vFk+++++++ ++ k+
  Cse_sc068574.1_g010.1 208 KSMLLLPTDFVALARIG--TKKNIIIKSLDGNETQMALQSyeLRWSTRYCFSVGWMAFKRSNNISDGDECVFKYIRSEDKMCLAKI 291
                            45699*****9555433..34579*******99999996558888889***************************98877666665 PP
3B3331e-103694431589
                            -EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                     B3  15 rlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                             l+++ +f++   ++++e  t+tl++ +g  +++ v    r+ks +y+ ++GWkeF ++n++ +gD  vFk++ +++
  Cse_sc068574.1_g010.1 369 KLRFSPDFVALARIDTRE--TITLKNDDGceKEMPVHSDKRRKSTSYYVATGWKEFQQSNDILQGDKYVFKFIISED 443
                            466677777555666544..89999999966777777777888888*************************875444 PP
4B330.75.5e-105125981298
                            HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                     B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                            ++++l+lp +f++  g++++e   +++ +++g++ ++ +    rk s +y l+kG + F ++n++ +g  +vFk++ ++++ ++ k++
  Cse_sc068574.1_g010.1 512 TTRNLYLPIDFVRLAGIDTKE--NIIMISLDGNECQMVVGKdtRKPSTKYHLSKGVNAFMRSNNISQGNKCVFKYIASEDKVCLAKII 597
                            45679*******888888655..6***************6655666666***************************988887777776 PP

                            - CS
                     B3  98 r 98 
                            +
  Cse_sc068574.1_g010.1 598 K 598
                            5 PP
5B332.12.1e-106917661893
                            --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                     B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                            +p +f+++ g++  ++ktltl  ++g ++e+ ++y kk+++  y+  k W eF + n + egD +vFk++ ++++ ++
  Cse_sc068574.1_g010.1 691 MPVDFVRSAGID--TKKTLTLLGLDGYEMEMPVRYHKKGEWkgYYVNKRWPEFQRNNAILEGDKCVFKFITSDDKLCL 766
                            6999**999988..4569********99999999999998899*************************9975444344 PP
Sequence ? help Back to Top
Protein Sequence    Length: 937 aa     Download sequence    
MISLDGSESQ MAVWKGKRQP ASTRYHLTEG WYAFMHTNDI SQGDKCVFKY ITSEDKMCLA  60
KIIKALATEV DVDDMDPSFV VTISITHKHM LLLPPDFVAL ARIDTKENII MKSLDGNESQ  120
MAVRPDKRFK SAQYNLSLGW VAFKQRNNIS QGDECVFKYI TSEDKMCLVK ITKASATEVD  180
DSMDVEDEND TNDDADPFFV VTIIPSHKSM LLLPTDFVAL ARIGTKKNII IKSLDGNETQ  240
MALQSYELRW STRYCFSVGW MAFKRSNNIS DGDECVFKYI RSEDKMCLAK ITKKITRATE  300
LHDGDPSFVV TISITHKHML YDEDVDEEGK GKDAKLVDED DDNDNEEDAY DYDGDPFFIL  360
TISKANQYKL RFSPDFVALA RIDTRETITL KNDDGCEKEM PVHSDKRRKS TSYYVATGWK  420
EFQQSNDILQ GDKYVFKFII SEDKICLAKI TERKTPARSL PPAAEAPVVD ADDVEDDDIM  480
DDKDTEDGND EDEDEYVELV DEDDPFFVTT ITTRNLYLPI DFVRLAGIDT KENIIMISLD  540
GNECQMVVGK DTRKPSTKYH LSKGVNAFMR SNNISQGNKC VFKYIASEDK VCLAKIIKAQ  600
AKKVDVDDED PSFVVTITTT HKTMLRFLSD FVTLAGIDKK KTIVFKNLNG FEKEIAVQHD  660
KQFRSTTYFV ASGWKEFLRD TDISEGDICY MPVDFVRSAG IDTKKTLTLL GLDGYEMEMP  720
VRYHKKGEWK GYYVNKRWPE FQRNNAILEG DKCVFKFITS DDKLCLTKIN KKNPTSSLPP  780
ATGDDEDENE DVERVDDEDP FFVATINHKF ILRLPPDFVA LAKIDTREKI IIRSLDGNER  840
QMAIHSFRQF RLTRYHFSIG WPAFRRSNNI SEGDECVFKY IRSEDKMCLV RVTKRNIQAR  900
SSPPTAVDTE MRVDADDVED DDGIADEDED ETAELVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.14e-09B3 family protein