PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc068076.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 527aa    MW: 58108 Da    PI: 5.3565
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc068076.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS228.72.8e-702395212286
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                             +lL+e+A a+++g++  a+++L+r s+ ++ +g+p qRl + +t AL++r++          +p++ts+   ++++ +++l+++ sP
  Cse_sc068076.1_g010.1 239 NQLLTEAAGAITDGKQDTASEILTRASKYSNARGTPEQRLCFNITTALKTRMSV--------NEPKTTSDLYGKDHILSTQLLYDKSP 318
                            689*************************************************98........5777777777**************** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRp..eg.......ppslRiTgvgspesgskeeleetgerLak 167
                            ++k+++++aN+aIlea    ++vH++Dfdi++G+Q++ Ll+++a +R+  e        p +l++T++++  +g  e+l+ +ge L++
  Cse_sc068076.1_g010.1 319 CFKLGFIAANNAILEAG---KKVHVLDFDIGNGVQYMYLLNEIAaAREarEArgddiqtPFTLKLTTMADFGNGGVERLKLVGEGLKE 403
                            **************996...68*********************966765511456666466*********9999************** PP

                   GRAS 168 fAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFle 255
                            +A++lgv+f++nvl   +l ++++ +L+v+++E+l+Vn++++l+rl+desv++e+ rdevL+ vk+lsP +v+vveqe++ n++sF +
  Cse_sc068076.1_g010.1 404 LANKLGVTFSYNVL-NLKLCEINTTSLAVENDEVLVVNFAFKLFRLPDESVTTENLRDEVLRRVKGLSPALVTVVEQELNGNTASFET 490
                            *************5.889********************************************************************** PP

                   GRAS 256 rflealeyysalfdsleaklpreseerikvE 286
                            r+++a+ yy al++sl+a+++r++++r+k++
  Cse_sc068076.1_g010.1 491 RVSQACGYYLALLESLDATIGRDHSDRVKID 521
                            ***************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
MSSGYPNGHA HQDYYNNINM NMNINNNVNG RSMSTYRSPL AGILNDRRQD LIGKRSLAEF  60
QHQQHQQQQL LLQQASFYLR NVKPRSYSSN NNLADFSTSS ALLNVPRYGV PVMQSFNNNL  120
GMMGTNIYQN TLRAGGYSLP APVPASVKQA QTLVTNNENN NNNNMMKHLQ ELEKQLLLDD  180
EDVENDVSGV TNSEWSEMMS PPVILTKAEN NILSPSPTSS SSSSCASTSA SPAGPVNINQ  240
LLTEAAGAIT DGKQDTASEI LTRASKYSNA RGTPEQRLCF NITTALKTRM SVNEPKTTSD  300
LYGKDHILST QLLYDKSPCF KLGFIAANNA ILEAGKKVHV LDFDIGNGVQ YMYLLNEIAA  360
AREAREARGD DIQTPFTLKL TTMADFGNGG VERLKLVGEG LKELANKLGV TFSYNVLNLK  420
LCEINTTSLA VENDEVLVVN FAFKLFRLPD ESVTTENLRD EVLRRVKGLS PALVTVVEQE  480
LNGNTASFET RVSQACGYYL ALLESLDATI GRDHSDRVKI DXWEMEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.13e-74GRAS family protein