PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc067953.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 532aa MW: 61998.7 Da PI: 9.5364

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc067953.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.4	5.2e-09	13	60	44	90
FAR1 44 ekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +++++e++ rt++ +rtgC a++k k+++ + k+e++++e++HnH++ Cse_sc067953.1_g010.1 13 SEETSETQIRTSSISRTGCMARVKFKLNSdRTKYELYDFEENHNHTCI 60 33445788999****************99************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
EGLPKGVNKD TMSEETSETQ IRTSSISRTG CMARVKFKLN SDRTKYELYD FEENHNHTCI 60 PVVYINLSKK RKKMSHKRQI YMQQLGGTNI GATRAHHLYA STNGGYDSVD ATETEFRNNK 120 RDLNSHIGDS DAQMLITKME NRKKHVANFS FEYAVENSEL TALFWADEMA KYNYREFGDT 180 ISFDATFRTN KCFLKAFSKQ PRLVVTDQDP PMRKVVATVF KESKHRLCMW HITNKLPFKI 240 CKTILDNGTF RRRLHRLVWS LYVDPEEFVG KWLSLINEFN LQENKWLSDM FEIRERWILA 300 YFKDVELCGL MRTTSRSESE NSFFSNFTTS GSTLLNFMMG FESAMERQRH KQEVLDDQTI 360 QKVPRYKTKL AIERHVAKIY TRTIFLLIQD EINSAVYNCH QVSVVIQDGI EVLTIKELRE 420 IMHRKSKKKY NFEETEVQNR RDGTKKELRF KVSTNVSDGT MLTEFVERIK ILRSEVEEAN 480 PNAKPLTKKE MFNIQLGVET PATNDVQNPT KCKNKGDPPA GQRMKGDLEK AS

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

EGLPKGVNKD TMSEETSETQ IRTSSISRTG CMARVKFKLN SDRTKYELYD FEENHNHTCI  60
PVVYINLSKK RKKMSHKRQI YMQQLGGTNI GATRAHHLYA STNGGYDSVD ATETEFRNNK  120
RDLNSHIGDS DAQMLITKME NRKKHVANFS FEYAVENSEL TALFWADEMA KYNYREFGDT  180
ISFDATFRTN KCFLKAFSKQ PRLVVTDQDP PMRKVVATVF KESKHRLCMW HITNKLPFKI  240
CKTILDNGTF RRRLHRLVWS LYVDPEEFVG KWLSLINEFN LQENKWLSDM FEIRERWILA  300
YFKDVELCGL MRTTSRSESE NSFFSNFTTS GSTLLNFMMG FESAMERQRH KQEVLDDQTI  360
QKVPRYKTKL AIERHVAKIY TRTIFLLIQD EINSAVYNCH QVSVVIQDGI EVLTIKELRE  420
IMHRKSKKKY NFEETEVQNR RDGTKKELRF KVSTNVSDGT MLTEFVERIK ILRSEVEEAN  480
PNAKPLTKKE MFNIQLGVET PATNDVQNPT KCKNKGDPPA GQRMKGDLEK AS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	69	73	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-40	FAR1 family protein