PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc065697.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 214aa MW: 24647.6 Da PI: 4.8714 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.6 | 9.1e-08 | 160 | 206 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 a n + r RR++i ++ +eL +l+P +K++ ae+ + A +Y+k Lq Cse_sc065697.1_g010.1 160 AQNLAARARRRKISEKTQELGKLIPGG-----QKMNTAEMFQAAFKYVKFLQ 206 679999*******************86.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MALSFYTNWY NDDSSVTSLL WPPELHCFHE DSTFYDTRIN PIFDPNYTNN LDFPGLFSSW 60 YSVEPSSNLF KQELQDPYYH TFPYSNTFQH GNLLPEYAMG PELPSLLPPF PNSLTHQGSG 120 VDTLPPWYDC GLQEHAQVEE VSNMKVKKQD ASNEERSLSA QNLAARARRR KISEKTQELG 180 KLIPGGQKMN TAEMFQAAFK YVKFLQAQCW IDIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30670.1 | 2e-19 | bHLH family protein |